Files
NexQuant/rdagent/components/coder/model_coder/eva_utils.py
T
you-n-g f78175b37a feat: refactor for general data science (#498)
* refine ds modal for more cases: eval and es

* update model template

* prompts for model and ensemble

* fix a bug

* fix a bug

* init: ds workflow evovingstrategy

* Adding ensemble (#505)

* Initial Draft

* Updating logic for init

* Revising

* Successful Testing

* Updating to use the latest & right class

* bug: bug-fixing for testing

* data science loop changes

* data science loop base

* ds loop feedback

* fix

* remove measure_time because it's duplicated (in LoopBase)

* add the knowledge query for data_loader & feature

* edit ds workflow evaluator

* data_loader bug fix

* stop evolving when all tasks completed

* llm app change

* fix break all complete strategy

* Adding queried knowledge (#508)

Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>

* fix loop bug

* ds workflow evaluator; test; refine prompts

* workflow spec

* fix ci

* feature task changes

* ds loop change

* fix a bug in feat

* add query knowledge for model and workflow

* llm_debug info(for show) using pickle instead of json

* remove NextLoopException

* loop change

* coder raise CoderError when all sub_tasks failed

* rename code_dict to file_dict in FBWorkspace

* add CoSTEER unittest

* now show self.version in Task.get_task_information(), simplify CoSTEER sub tasks definition

* remove some properties in ModelTask, add model_type in it.

* fix llm app bug

* llm web app bug fix

* ds loop bug fix

* fix: give component code to feature&ens eval

* loop catch error bug

* rename load_from_raw_data to load_data

* feat: Add debug data creation functionality for data science scenarios

* support local folder (#511)

* support local folder

* remove unnecessary random

* KaggleScen Subclass

* small fix

* use template for style description

* update default scen to kaggle

* update sample data script

* make sure frac < 1

* fix a bug

* feature spec changes

* fix

* changeimport order

* clear unnecessary std outputs

* fix a typo

* create sample folder after unzip kaggle data

* feature/model test script update

* Align the data types across modules.

* fix a bug in model eval

* show line number

* move sample entry point to app

* spec & model prompt changes

* Refine the competition specification to address the data type problem and the coherence issue.

* fix some bugs

* add file filter in FBworkspace.code property

* support non-binary prediction

* avoid too much warnings

* fix a bug in ensemble module

* filtered the knowledge query in all modules

* delete RAG in idea proposal

* refine the code in ensemble

* show exp workspace in llm_st

* exp_gen bug fix

* feedback bug fix

* use `feature` instead of `feat01`

* Trace & method of judging if exp is completed change

* fix a bug in package calling and execute ci

* fix code

* bug fix

* bug fix

* fix a bug

* fix some bugs

* fix a bug

* refactor: Enhance error handling and feedback in data science loop

* support different use_azure on chat and embedding models

* multi-model proposal logic

* fix a small syntax error

* loopBase and some changes

* ensemble scores change

* fbworkspace.code -> .all_codes

* use all model codes in workflow coder

* check scores.csv's keys(model_names)

* model name changes

* add a todo in  ensemble test

* sota_exp changes

* give model info in exp gen

* add runner time limit

* config using debug data or not in evals

* exp to feedback base

* add feature code when writing model task

* small problem

* copying during sampling

* update

* refactor: Simplify code handling and improve workspace management

* model part output fix

* print model's execution time

* bug fix

* ensemble test fix

* ens small change

* ens_test bug fix

* Refine partial expansion logic to display only a few subfolders when their structure is uniform, improving readability in nested directories.

* several update on prompts

* sample subfolders

* Filter the stdout after code execution to remove irrelevant information e.g. progress bars, whitespace characters, excessive line breaks.

* Add some more prompts and comments

* several update on the first init rounds

* model timeout as error

* fix pattern of getting model codes in workspace

* small bux fix on model prompts

* remove get_code_with_key since we have regex pattern

* fix: Correct tqdm progress bar update logic in LoopBase class

* feat: Add diff generation and enhance feedback mechanism in data science loop

* update some fix to model and workflow prompts

* refine the logic of progress bar filter

* add last_successful_exp in exp_gen

* fix a one line bug

* add a hint in prompt

* fix data sample for bms

* fix data sample for bms

* hypothesis small fix

* crawler readme update

* fix component gen

* fix bug

* annotation change

* load description.md if it exists

* refactor: Simplify SOTA description handling in feedback and prompts

* refactor: Use shared templates for feedback and experiment descriptions

* change webapp for model codes changes

* update proposal

* add timeout message for docker run output

* fix

* refine the code in docker time processing

* use .shape instead of len() when do shape eval

* won't change size during iteration

* support bson sample

* sample support jsonl and bson

* add former_code to coder prompts

* a little speed us in debug data creating

* filter progress bar when eval ens and main

* avoid costeer makes no change to former code

* fix several log error

* add timeout judge threshold

* fix some bugs in the evaluation of component output shapes

* File structure for supporting litellm (#517)

Co-authored-by: Young <afe.young@gmail.com>

* ignore submission and show processing

* ignore submission and show processing

* add efficiency notice

* refactor: Enhance error message with detailed feedback summary

* refactor: Simplify component handling in DSExpGen class

* refactor: Update code structure and add docstring for clarity

* reserve one sample to each label in data sampling

* add Evaluation info

* refine costeer code to avoid giving same code twice

* use raw_description as plain text

* add a prompt hint to avoid same dict key

* model task name bug in first model exp gen

* fix a typo

* add some debug info in costeer tests

* task init change

* enhance data sampling

* refine the code in data_loader

* more reasonable loop

* fix a bug in data folder description

* add error msg & traceback to execution feedback

* fix llm error msg detection

* add task information to costeer eval & add cache to docker run(use zipfile to store the whole workspace)

* fix CI first round

* fix CI second round

* use txt to store test script to avoid pytest

* remove zipfile in requirements

* add azure.identity to requirements

* ignore debug web page

* component test changes

* remove redundent task_desc in model coder

* feat: Add APE module and prompts for automated prompt engineering

* fix: Update .gitignore and improve text formatting in eval.py

* refactor: Update print output and improve code comments and imports

* style: Fix string formatting and import order in ape.py and fmt.py

* exclude ape

* add a data folder notice

* reduce unnecessary output to stdout

* refine the code of describe_data_folder

* fix ci

* style: streamlit style update (#522)

* streamlit style update

* fix import

* fix format

* fix llm_st loop progress bar

* debugapp small change

* fix model str

* refine some prompts

* fix model str

* fix CI

* refine the logic associated with the data_folder

* fix ci

* small change

* set filter_progress_bar as default in execute

* model proposal with workflow

* add submission check in workflow eval

* fix bug

* small change

* fix CI

* fix CI

* refactor: Move generate_diff to utils and update DSExpGen logic

* more reasonable prompt describing metric direction

* fix a minor jinja2 bug

* quick fix exp_gen bugs

* fix the following bug

* fix

* fix some bugs

* remove workflow from model

* add pending_tasks_list in data science to enable coding model and workflow

* refine the code for handling JSON-formatted data descriptions

* assert with information

* ensure correct csv file name

* add logging to help record the output

* log competition

* add log tag for debug llm app

* test: Test ds refactor ll (#523)

* fix bugs to former scenario

* fix a bug because coding in rdloop changed

* fix the bug when feedback gets no hypothesis

* fix trace structure

* change all trace hist when merging hypothesis to experiments

* ignore some error in ruff

* fix kaggle scenario bugs

* refine one line

* another bug

* another small bug

* fix ui bugs

* chage kaggle  train.py path

---------

Co-authored-by: Xu Yang <peteryang@vip.qq.com>

* fix CI

* Update rdagent/app/data_science/loop.py

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* add samplecsv into spec prompts

* fix CI

---------

Co-authored-by: TPLin22 <tplin2@163.com>
Co-authored-by: yuanteli <1957922024@qq.com>
Co-authored-by: Xisen Wang <118058822+xisen-w@users.noreply.github.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: Xu Yang <peteryang@vip.qq.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
Co-authored-by: Tim <illking@foxmail.com>
Co-authored-by: 炼金术师华华 <37462254+YeewahChan@users.noreply.github.com>
Co-authored-by: Linlang <30293408+SunsetWolf@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2025-01-17 22:53:05 +08:00

190 lines
6.8 KiB
Python

import json
from pathlib import Path
from typing import Tuple
import numpy as np
from jinja2 import Environment, StrictUndefined
from rdagent.components.coder.model_coder.model import ModelFBWorkspace, ModelTask
from rdagent.core.evaluation import Evaluator
from rdagent.core.experiment import Task, Workspace
from rdagent.core.prompts import Prompts
from rdagent.oai.llm_conf import LLM_SETTINGS
from rdagent.oai.llm_utils import APIBackend
evaluate_prompts = Prompts(file_path=Path(__file__).parent / "prompts.yaml")
# This shape evaluator is also used in data_science
def shape_evaluator(prediction: np.ndarray, target_shape: Tuple = None) -> Tuple[str, bool]:
if target_shape is None or prediction is None:
return (
"No output generated from the model. No shape evaluation conducted.",
False,
)
pre_shape = prediction.shape
if pre_shape == target_shape:
return "The shape of the output is correct.", True
else:
return (
f"The shape of the output is incorrect. Expected {target_shape}, but got {pre_shape}.",
False,
)
def value_evaluator(
prediction: np.ndarray,
target: np.ndarray,
) -> Tuple[np.ndarray, bool]:
if prediction is None:
return "No output generated from the model. Skip value evaluation", False
elif target is None:
return (
"No ground truth output provided. Value evaluation not impractical",
False,
)
else:
# Calculate the mean absolute difference
diff = np.mean(np.abs(target - prediction))
return (
f"The value of the output is correct. The mean absolute difference is {diff}.",
diff < 0.1,
)
class ModelCodeEvaluator(Evaluator):
def evaluate(
self,
target_task: Task,
implementation: Workspace,
gt_implementation: Workspace,
model_execution_feedback: str = "",
model_value_feedback: str = "",
):
assert isinstance(target_task, ModelTask)
assert isinstance(implementation, ModelFBWorkspace)
if gt_implementation is not None:
assert isinstance(gt_implementation, ModelFBWorkspace)
model_task_information = target_task.get_task_information()
code = implementation.all_codes
system_prompt = (
Environment(undefined=StrictUndefined)
.from_string(evaluate_prompts["evaluator_code_feedback"]["system"])
.render(
scenario=(
self.scen.get_scenario_all_desc(target_task, filtered_tag=target_task.model_type)
if self.scen is not None
else "No scenario description."
)
)
)
execution_feedback_to_render = model_execution_feedback
for _ in range(10): # 10 times to split the content is enough
user_prompt = (
Environment(undefined=StrictUndefined)
.from_string(
evaluate_prompts["evaluator_code_feedback"]["user"],
)
.render(
model_information=model_task_information,
code=code,
model_execution_feedback=execution_feedback_to_render,
model_value_feedback=model_value_feedback,
gt_code=gt_implementation.all_codes if gt_implementation else None,
)
)
if (
APIBackend().build_messages_and_calculate_token(
user_prompt=user_prompt,
system_prompt=system_prompt,
)
> LLM_SETTINGS.chat_token_limit
):
execution_feedback_to_render = execution_feedback_to_render[len(execution_feedback_to_render) // 2 :]
else:
break
critic_response = APIBackend().build_messages_and_create_chat_completion(
user_prompt=user_prompt,
system_prompt=system_prompt,
json_mode=False,
)
return critic_response, None
class ModelFinalEvaluator(Evaluator):
def evaluate(
self,
target_task: Task,
implementation: Workspace,
gt_implementation: Workspace,
model_execution_feedback: str,
model_shape_feedback: str,
model_value_feedback: str,
model_code_feedback: str,
):
assert isinstance(target_task, ModelTask)
assert isinstance(implementation, ModelFBWorkspace)
if gt_implementation is not None:
assert isinstance(gt_implementation, ModelFBWorkspace)
system_prompt = (
Environment(undefined=StrictUndefined)
.from_string(evaluate_prompts["evaluator_final_feedback"]["system"])
.render(
scenario=(
self.scen.get_scenario_all_desc(target_task, filtered_tag=target_task.model_type)
if self.scen is not None
else "No scenario description."
)
)
)
execution_feedback_to_render = model_execution_feedback
for _ in range(10): # 10 times to split the content is enough
user_prompt = (
Environment(undefined=StrictUndefined)
.from_string(
evaluate_prompts["evaluator_final_feedback"]["user"],
)
.render(
model_information=target_task.get_task_information(),
model_execution_feedback=execution_feedback_to_render,
model_shape_feedback=model_shape_feedback,
model_code_feedback=model_code_feedback,
model_value_feedback=model_value_feedback,
)
)
if (
APIBackend().build_messages_and_calculate_token(
user_prompt=user_prompt,
system_prompt=system_prompt,
)
> LLM_SETTINGS.chat_token_limit
):
execution_feedback_to_render = execution_feedback_to_render[len(execution_feedback_to_render) // 2 :]
else:
break
final_evaluation_dict = json.loads(
APIBackend().build_messages_and_create_chat_completion(
user_prompt=user_prompt,
system_prompt=system_prompt,
json_mode=True,
),
)
if isinstance(final_evaluation_dict["final_decision"], str) and final_evaluation_dict[
"final_decision"
].lower() in ("true", "false"):
final_evaluation_dict["final_decision"] = bool(final_evaluation_dict["final_decision"])
return (
final_evaluation_dict["final_feedback"],
final_evaluation_dict["final_decision"],
)