fix a bug in the definition of source data shape (#335)

This commit is contained in:
WinstonLiyt
2024-09-25 18:14:59 +08:00
committed by GitHub
parent 961f6b79bd
commit 861cd2eaf1
2 changed files with 3 additions and 77 deletions
@@ -1,76 +0,0 @@
import numpy as np
import torch
import torch.nn as nn
import torch.nn.functional as F
from torch.utils.data import DataLoader, TensorDataset
from tqdm import tqdm
# Check if a GPU is available
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
# Restored three-layer model structure
class FeatureInteractionModel(nn.Module):
def __init__(self, num_features):
super(FeatureInteractionModel, self).__init__()
self.fc1 = nn.Linear(num_features, 128)
self.bn1 = nn.BatchNorm1d(128)
self.fc2 = nn.Linear(128, 64)
self.bn2 = nn.BatchNorm1d(64)
self.fc3 = nn.Linear(64, 1)
self.dropout = nn.Dropout(0.3)
def forward(self, x):
x = F.relu(self.bn1(self.fc1(x)))
x = F.relu(self.bn2(self.fc2(x)))
x = self.dropout(x)
x = torch.sigmoid(self.fc3(x))
return x
# Training function
def fit(X_train, y_train, X_valid, y_valid):
num_features = X_train.shape[1]
model = FeatureInteractionModel(num_features).to(device)
criterion = nn.BCELoss() # Binary classification problem
optimizer = torch.optim.Adam(model.parameters(), lr=0.001)
# Convert to TensorDataset and create DataLoader
train_dataset = TensorDataset(
torch.tensor(X_train.to_numpy(), dtype=torch.float32), torch.tensor(y_train.reshape(-1), dtype=torch.float32)
)
valid_dataset = TensorDataset(
torch.tensor(X_valid.to_numpy(), dtype=torch.float32), torch.tensor(y_valid.reshape(-1), dtype=torch.float32)
)
train_loader = DataLoader(train_dataset, batch_size=32, shuffle=True)
valid_loader = DataLoader(valid_dataset, batch_size=32, shuffle=False)
# Train the model
model.train()
for epoch in range(5):
print(f"Epoch {epoch + 1}/5")
epoch_loss = 0
for X_batch, y_batch in tqdm(train_loader, desc="Training", leave=False):
X_batch, y_batch = X_batch.to(device), y_batch.to(device) # Move data to the device
optimizer.zero_grad()
outputs = model(X_batch).squeeze(1) # Reshape outputs to [32]
loss = criterion(outputs, y_batch) # Adjust target shape
loss.backward()
optimizer.step()
epoch_loss += loss.item()
print(f"End of epoch {epoch + 1}, Avg Loss: {epoch_loss / len(train_loader):.4f}")
return model
# Prediction function
def predict(model, X):
model.eval()
predictions = []
with torch.no_grad():
X_tensor = torch.tensor(X.values, dtype=torch.float32).to(device) # Move data to the device
for i in tqdm(range(0, len(X_tensor), 32), desc="Predicting", leave=False):
batch = X_tensor[i : i + 32] # Predict in batches
pred = model(batch).squeeze().cpu().numpy() # Move results back to CPU
predictions.extend(pred)
return np.array(predictions) # Return boolean predictions
@@ -24,6 +24,7 @@ class KGScenario(Scenario):
super().__init__()
self.competition = competition
self.competition_descriptions = crawl_descriptions(competition)
self.input_shape = None
self._source_data = self.source_data
self.competition_type = None
@@ -121,6 +122,7 @@ class KGScenario(Scenario):
buffer = io.StringIO()
X_valid.info(verbose=True, buf=buffer, show_counts=True)
data_info = buffer.getvalue()
self.input_shape = X_valid.shape
return data_info
preprocess_experiment = KGFactorExperiment([])
@@ -141,7 +143,7 @@ class KGScenario(Scenario):
pickle.dump(X_test, open(data_folder / "X_test.pkl", "wb"))
pickle.dump(others, open(data_folder / "others.pkl", "wb"))
self.input_shape = X_train.shape
self.input_shape = X_valid.shape
buffer = io.StringIO()
X_valid.info(verbose=True, buf=buffer, show_counts=True)