fix: runner COSTEER evaluator (#693)

* fix scores.csv and submission.csv check in runner eval

* add coverage check info in running COSTEER feedback

* feedback value fix
This commit is contained in:
XianBW
2025-03-17 23:12:59 +08:00
committed by GitHub
parent 6a6c9832f4
commit 4c9c29d244
3 changed files with 84 additions and 40 deletions
@@ -129,8 +129,8 @@ class WorkflowGeneralCaseSpecEvaluator(CoSTEEREvaluator):
)
if score_ret_code != 0:
wfb.final_decision = False
wfb.execution += "\n" + score_check_text
wfb.return_checking += "\n" + score_check_text
if submission_ret_code != 0:
wfb.final_decision = False
wfb.execution += "\nSubmission file check failed."
wfb.return_checking += "\nSubmission file check failed."
return wfb
@@ -1,8 +1,9 @@
import json
import os
import re
from pathlib import Path
import pandas as pd
from rdagent.app.data_science.conf import DS_RD_SETTING
from rdagent.components.coder.CoSTEER.evaluators import (
CoSTEEREvaluator,
@@ -49,31 +50,46 @@ class DSCoSTEERCoSTEEREvaluator(CoSTEEREvaluator):
stdout = implementation.execute(env=env, entry="coverage run main.py")
stdout = re.sub(r"=== Start of EDA part ===(.*)=== End of EDA part ===", "", stdout)
# Check score file
score_fp = implementation.workspace_path / "scores.csv"
score_ret_code = 0
score_check_text = ""
if not score_fp.exists():
stdout += "\n Metrics file (scores.csv) is not generated!"
logger.warning("Metrics file (scores.csv) is not generated!")
score_check_text = "[Error] Metrics file (scores.csv) is not generated!"
score_ret_code = 1
else:
stdout += "\n Metrics file (scores.csv) is generated."
try:
score_df = pd.read_csv(score_fp, index_col=0)
model_set_in_scores = set(score_df.index)
model_set_in_folder = set(
f[:-3] for f in implementation.file_dict.keys() if re.match(r"^model_(?!test)\w+\.py$", f)
)
if model_set_in_scores != model_set_in_folder.union({"ensemble"}):
score_check_text += f"\n[Error] The scores dataframe does not contain the correct model names as index.\ncorrect model names are: {model_set_in_folder.union({'ensemble'})}\nscore_df is:\n{score_df}"
score_ret_code = 1
except Exception as e:
logger.error(f"Error in checking the scores.csv file: {e}")
score_check_text += f"\n[Error] in checking the scores.csv file: {e}\nscores.csv's content:\n-----\n{score_fp.read_text()}\n-----"
score_ret_code = 1
submission_fp = implementation.workspace_path / "submission.csv"
if not submission_fp.exists():
stdout += "\n Submission file (submission.csv) is not generated!"
else:
# DockerEnv for MLEBench submission validation
mde = get_ds_env("mlebench")
mde.conf.extra_volumes = {
f"{DS_RD_SETTING.local_data_path}/zip_files": "/mle/data",
}
mde.prepare()
# MLEBench Check
mle_check_code = (
(Path(__file__).absolute().resolve().parent / "eval_tests" / "mle_submission_format_test.txt")
.read_text()
.replace("<competition_id>", self.scen.competition)
)
implementation.inject_files(**{"test/mle_submission_format_test.py": mle_check_code})
stdout += f"\n MLEBench submission check:"
stdout += implementation.execute(env=mde, entry="python test/mle_submission_format_test.py")
# DockerEnv for MLEBench submission validation
mde = get_ds_env("mlebench")
mde.conf.extra_volumes = {
f"{DS_RD_SETTING.local_data_path}/zip_files": "/mle/data",
}
mde.prepare()
# MLEBench Check
mle_check_code = (
(Path(__file__).absolute().resolve().parent / "eval_tests" / "mle_submission_format_test.txt")
.read_text()
.replace("<competition_id>", self.scen.competition)
)
implementation.inject_files(**{"test/mle_submission_format_test.py": mle_check_code})
submission_check_out, submission_ret_code = implementation.execute_ret_code(
env=mde, entry="python test/mle_submission_format_test.py"
)
stdout += f"\nMLEBench submission check:\n{submission_check_out}"
system_prompt = T(".prompts:DSCoSTEER_eval.system").r(
scenario=self.scen.get_scenario_all_desc(),
@@ -94,21 +110,46 @@ class DSCoSTEERCoSTEEREvaluator(CoSTEEREvaluator):
if feedback:
# remove unused files
implementation.execute(env=env, entry="coverage json -o coverage.json")
if Path(implementation.workspace_path / "coverage.json").exists():
with open(implementation.workspace_path / "coverage.json") as f:
used_files = set(json.load(f)["files"].keys())
logger.info("All used scripts: {}".format(used_files))
all_python_files = set(Path(implementation.workspace_path).rglob("*.py"))
unused_files = [
py_file
for py_file in all_python_files
if not (py_file.name in used_files or py_file.name.endswith("test.py"))
]
if unused_files:
logger.warning(f"Unused scripts: {unused_files}")
implementation.inject_files(
**{file_path.name: implementation.DEL_KEY for file_path in unused_files}
)
os.remove(implementation.workspace_path / "coverage.json")
coverage_report_path = implementation.workspace_path / "coverage.json"
if coverage_report_path.exists():
used_files = set(json.loads(coverage_report_path.read_text())["files"].keys())
coverage_report_path.unlink()
logger.info(f"All used scripts: {used_files}")
use_one_model = False
for f in used_files:
if f.startswith("model_") and "test" not in f:
use_one_model = True
break
if not use_one_model:
feedback.final_decision = False
logger.warning("No model script is used in `main.py`.")
feedback.code += "\n[Error] No model script is used in `main.py`."
all_python_files = set(Path(implementation.workspace_path).rglob("*.py"))
must_have_files = ["load_data.py", "feature.py", "ensemble.py"]
unused_files = [
py_file.name
for py_file in all_python_files
if not (py_file.name in used_files or py_file.name.endswith("test.py"))
]
if unused_files:
logger.warning(f"Unused scripts: {unused_files}")
error_files = set(unused_files).intersection(set(must_have_files))
if error_files:
feedback.final_decision = False
logger.warning(f"{error_files} must be used in `main.py`.")
feedback.code += f"\n[Error] {error_files} must be used in `main.py`."
elif use_one_model:
logger.info("Remove unused scripts.")
implementation.inject_files(**{file: implementation.DEL_KEY for file in unused_files})
if score_ret_code != 0:
feedback.final_decision = False
feedback.return_checking += "\n" + score_check_text
if submission_ret_code != 0:
feedback.final_decision = False
feedback.return_checking += "\nSubmission file check failed."
return feedback
@@ -3,6 +3,9 @@ from pathlib import Path
from mlebench.grade import validate_submission
from mlebench.registry import registry
# Check if our submission file exists
assert Path('submission.csv').exists(), "Error: submission.csv not found"
COMPETITION_ID = "<competition_id>"
new_registry = registry.set_data_dir(Path("/mle/data"))
competition = new_registry.get_competition(COMPETITION_ID)