Eval process (#31)

* test data load process and fix bug

* fix bug when evaluating

* refine json content

---------

Co-authored-by: USTCKevinF <fengwenjun@mail.ustc.edu.cn>
Co-authored-by: xuyang1 <xuyang1@microsoft.com>
This commit is contained in:
Haoxue
2024-06-27 09:39:17 +01:00
committed by GitHub
parent f20dc4482b
commit 07a77dd802
7 changed files with 57 additions and 49 deletions
@@ -1,18 +1,18 @@
from rdagent.core.conf import BenchmarkSettings
from rdagent.benchmark.conf import BenchmarkSettings
from rdagent.core.utils import import_class
from rdagent.benchmark.eval_method import FactorImplementEval
from rdagent.benchmark.data_process import load_eval_data
from rdagent.factor_implementation.task_loader.json_loader import FactorTestCaseLoaderFromJsonFile
# 1.read the settings
bs = BenchmarkSettings()
# 2.read and prepare the eval_data
test_cases = load_eval_data(bs.bench_version)
test_cases = FactorTestCaseLoaderFromJsonFile().load(bs.bench_data_path)
# 3.declare the method to be tested and pass the arguments.
# TODO: Whether it is necessary to define two Eval method classes for two data type?
method_cls = import_class(bs.bench_method_cls)
generate_method = method_cls(bs.bench_method_extra_kwargs)
generate_method = method_cls()
# 4.declare the eval method and pass the arguments.
eval_method = FactorImplementEval(
@@ -23,8 +23,4 @@ eval_method = FactorImplementEval(
)
# 5.run the eval
eval_method.eval()
# 6.save the result
eval_method.save(output_path = bs.bench_result_path)
res = eval_method.eval()
+4 -6
View File
@@ -2,24 +2,22 @@ from dotenv import load_dotenv
load_dotenv(verbose=True, override=True)
from dataclasses import field
from pathlib import Path
from typing import Literal, Optional, Union
from typing import Optional
from pydantic_settings import BaseSettings
DIRNAME = Path(__file__).absolute().resolve().parent
BENCHMARK_VERSION = Literal["paper", "amcV01", "amcV02train", "amcV02test"]
class BenchmarkSettings(BaseSettings):
ground_truth_dir: Path = DIRNAME / "ground_truth"
bench_version: Union[BENCHMARK_VERSION, str] = "paper"
bench_data_path: Path = DIRNAME / "example.json"
bench_test_round: int = 20
bench_test_round: int = 10
bench_test_case_n: Optional[int] = None # how many test cases to run; If not given, all test cases will be run
bench_method_cls: str = "scripts.factor_implementation.baselines.naive.one_shot.OneshotFactorGen"
bench_method_cls: str = "rdagent.factor_implementation.CoSTEER.CoSTEERFG"
bench_method_extra_kwargs: dict = field(
default_factory=dict,
) # extra kwargs for the method to be tested except the task list
+18 -25
View File
@@ -3,7 +3,7 @@ from typing import List, Tuple, Union
from tqdm import tqdm
from collections import defaultdict
from rdagent.core.conf import RD_AGENT_SETTINGS
from rdagent.factor_implementation.share_modules.factor_implementation_config import FACTOR_IMPLEMENT_SETTINGS
from rdagent.core.exception import ImplementRunException
from rdagent.core.task import (
TaskImplementation,
@@ -102,29 +102,25 @@ class BaseEval:
class FactorImplementEval(BaseEval):
def __init__(
self,
test_case: TestCase,
test_cases: TestCase,
method: TaskGenerator,
test_round: int = 10,
*args,
**kwargs,
):
# evaluator collection for online evaluation
online_evaluator_l = (
[
FactorImplementationCorrelationEvaluator,
FactorImplementationIndexEvaluator,
FactorImplementationIndexFormatEvaluator,
FactorImplementationMissingValuesEvaluator,
FactorImplementationRowCountEvaluator,
FactorImplementationSingleColumnEvaluator,
FactorImplementationValuesEvaluator,
],
)
super().__init__(online_evaluator_l, test_case, method, *args, **kwargs)
online_evaluator_l = [
FactorImplementationSingleColumnEvaluator(),
FactorImplementationIndexFormatEvaluator(),
FactorImplementationRowCountEvaluator(),
FactorImplementationIndexEvaluator(),
FactorImplementationMissingValuesEvaluator(),
FactorImplementationValuesEvaluator(),
FactorImplementationCorrelationEvaluator(hard_check=False),
]
super().__init__(online_evaluator_l, test_cases, method, *args, **kwargs)
self.test_round = test_round
def eval(self):
gen_factor_l_all_rounds = []
test_cases_all_rounds = []
res = defaultdict(list)
@@ -139,25 +135,22 @@ class FactorImplementEval(BaseEval):
print("Manually interrupted the evaluation. Saving existing results")
break
if len(gen_factor_l) != len(self.test_cases):
if len(gen_factor_l.corresponding_implementations) != len(self.test_cases.ground_truth):
raise ValueError(
"The number of cases to eval should be equal to the number of test cases.",
)
gen_factor_l_all_rounds.extend(gen_factor_l)
test_cases_all_rounds.extend(self.test_cases)
eval_res_l = []
gen_factor_l_all_rounds.extend(gen_factor_l.corresponding_implementations)
test_cases_all_rounds.extend(self.test_cases.ground_truth)
eval_res_list = multiprocessing_wrapper(
[
(self.eval_case, (gt_case.ground_truth, gen_factor))
(self.eval_case, (gt_case, gen_factor))
for gt_case, gen_factor in zip(test_cases_all_rounds, gen_factor_l_all_rounds)
],
n=RD_AGENT_SETTINGS.evo_multi_proc_n,
n=FACTOR_IMPLEMENT_SETTINGS.evo_multi_proc_n,
)
for gt_case, eval_res, gen_factor in tqdm(zip(test_cases_all_rounds, eval_res_list, gen_factor_l_all_rounds)):
res[gt_case.task.factor_name].append((gen_factor, eval_res))
eval_res_l.append(eval_res)
res[gt_case.target_task.factor_name].append((gen_factor, eval_res))
return res
+2 -2
View File
@@ -118,8 +118,8 @@ class TestCase:
def __init__(
self,
target_task: BaseTask,
ground_truth: TaskImplementation,
target_task: list[BaseTask] = [],
ground_truth: list[TaskImplementation] = [],
):
self.ground_truth = ground_truth
self.target_task = target_task
@@ -173,7 +173,7 @@ class FileBasedFactorImplementation(TaskImplementation):
FACTOR_IMPLEMENT_SETTINGS.file_based_execution_data_folder,
)
self.workspace_path.mkdir(exist_ok=True, parents=True)
source_data_path.mkdir(exist_ok=True, parents=True)
code_path = self.workspace_path / f"{self.target_task.factor_name}.py"
code_path.write_text(self.code)
@@ -9,13 +9,13 @@ SELECT_METHOD = Literal["random", "scheduler"]
class FactorImplementSettings(BaseSettings):
file_based_execution_data_folder: str = str(
(Path().cwd() / "factor_implementation_source_data").absolute(),
(Path().cwd() / "git_ignore_folder" / "factor_implementation_source_data").absolute(),
)
file_based_execution_workspace: str = str(
(Path().cwd() / "factor_implementation_workspace").absolute(),
(Path().cwd() / "git_ignore_folder" / "factor_implementation_workspace").absolute(),
)
implementation_execution_cache_location: str = str(
(Path().cwd() / "factor_implementation_execution_cache").absolute(),
(Path().cwd() / "git_ignore_folder" / "factor_implementation_execution_cache").absolute(),
)
enable_execution_cache: bool = True # whether to enable the execution cache
@@ -1,7 +1,8 @@
import json
from pathlib import Path
from rdagent.core.task import TaskLoader
from rdagent.factor_implementation.evolving.factor import FactorImplementTask
from rdagent.factor_implementation.evolving.factor import FactorImplementTask, FileBasedFactorImplementation
from rdagent.core.task import TestCase
class FactorImplementationTaskLoaderFromDict(TaskLoader):
@@ -21,7 +22,8 @@ class FactorImplementationTaskLoaderFromDict(TaskLoader):
class FactorImplementationTaskLoaderFromJsonFile(TaskLoader):
def load(self, json_file_path: Path) -> list:
factor_dict = json.load(json_file_path)
with open(json_file_path, 'r') as file:
factor_dict = json.load(file)
return FactorImplementationTaskLoaderFromDict().load(factor_dict)
@@ -29,3 +31,22 @@ class FactorImplementationTaskLoaderFromJsonString(TaskLoader):
def load(self, json_string: str) -> list:
factor_dict = json.loads(json_string)
return FactorImplementationTaskLoaderFromDict().load(factor_dict)
class FactorTestCaseLoaderFromJsonFile(TaskLoader):
def load(self, json_file_path: Path) -> list:
with open(json_file_path, 'r') as file:
factor_dict = json.load(file)
TestData = TestCase()
for factor_name, factor_data in factor_dict.items():
task = FactorImplementTask(
factor_name=factor_name,
factor_description=factor_data["description"],
factor_formulation=factor_data["formulation"],
variables=factor_data["variables"],
)
gt = FileBasedFactorImplementation(task, code=factor_data["gt_code"])
gt.execute()
TestData.target_task.append(task)
TestData.ground_truth.append(gt)
return TestData