diff --git a/recipe/tests/__init__.py b/recipe/tests/__init__.py deleted file mode 100644 index b438fd7..0000000 --- a/recipe/tests/__init__.py +++ /dev/null @@ -1 +0,0 @@ -"""Test suite for the gdptools package.""" diff --git a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/Readme.txt b/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/Readme.txt deleted file mode 100644 index cfff5f7..0000000 --- a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/Readme.txt +++ /dev/null @@ -1,69 +0,0 @@ -TM_WORLD_BORDERS-0.1.ZIP - -Provided by Bjorn Sandvik, thematicmapping.org - -Use this dataset with care, as several of the borders are disputed. - -The original shapefile (world_borders.zip, 3.2 MB) was downloaded from the Mapping Hacks website: -http://www.mappinghacks.com/data/ - -The dataset was derived by Schuyler Erle from public domain sources. -Sean Gilles did some clean up and made some enhancements. - - -COLUMN TYPE DESCRIPTION - -Shape Polygon Country/area border as polygon(s) -FIPS String(2) FIPS 10-4 Country Code -ISO2 String(2) ISO 3166-1 Alpha-2 Country Code -ISO3 String(3) ISO 3166-1 Alpha-3 Country Code -UN Short Integer(3) ISO 3166-1 Numeric-3 Country Code -NAME String(50) Name of country/area -AREA Long Integer(7) Land area, FAO Statistics (2002) -POP2005 Double(10,0) Population, World Polulation Prospects (2005) -REGION Short Integer(3) Macro geographical (continental region), UN Statistics -SUBREGION Short Integer(3) Geogrpahical sub-region, UN Statistics -LON FLOAT (7,3) Longitude -LAT FLOAT (6,3) Latitude - - -CHANGELOG VERSION 0.3 - 30 July 2008 - -- Corrected spelling mistake (United Arab Emirates) -- Corrected population number for Japan -- Adjusted long/lat values for India, Italy and United Kingdom - - -CHANGELOG VERSION 0.2 - 1 April 2008 - -- Made new ZIP archieves. No change in dataset. - - -CHANGELOG VERSION 0.1 - 13 March 2008 - -- Polygons representing each country were merged into one feature -- Åland Islands was extracted from Finland -- Hong Kong was extracted from China -- Holy See (Vatican City) was added -- Gaza Strip and West Bank was merged into "Occupied Palestinean Territory" -- Saint-Barthelemy was extracted from Netherlands Antilles -- Saint-Martin (Frensh part) was extracted from Guadeloupe -- Svalbard and Jan Mayen was merged into "Svalbard and Jan Mayen Islands" -- Timor-Leste was extracted from Indonesia -- Juan De Nova Island was merged with "French Southern & Antarctic Land" -- Baker Island, Howland Island, Jarvis Island, Johnston Atoll, Midway Islands - and Wake Island was merged into "United States Minor Outlying Islands" -- Glorioso Islands, Parcel Islands, Spartly Islands was removed - (almost uninhabited and missing ISO-3611-1 code) - -- Added ISO-3166-1 codes (alpha-2, alpha-3, numeric-3). Source: - https://www.cia.gov/library/publications/the-world-factbook/appendix/appendix-d.html - http://unstats.un.org/unsd/methods/m49/m49alpha.htm - http://www.fysh.org/~katie/development/geography.txt -- AREA column has been replaced with data from UNdata: - Land area, 1000 hectares, 2002, FAO Statistics -- POPULATION column (POP2005) has been replaced with data from UNdata: - Population, 2005, Medium variant, World Population Prospects: The 2006 Revision -- Added region and sub-region codes from UN Statistics Division. Source: - http://unstats.un.org/unsd/methods/m49/m49regin.htm -- Added LAT, LONG values for each country diff --git a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.dbf b/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.dbf deleted file mode 100644 index 64ea895..0000000 Binary files a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.dbf and /dev/null differ diff --git a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.prj b/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.prj deleted file mode 100644 index 0ae685b..0000000 --- a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.prj +++ /dev/null @@ -1 +0,0 @@ -GEOGCS["GCS_WGS_1984",DATUM["D_WGS_1984",SPHEROID["WGS_1984",6378137.0,298.257223563]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]] diff --git a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.shp b/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.shp deleted file mode 100644 index 63e155c..0000000 Binary files a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.shp and /dev/null differ diff --git a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.shx b/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.shx deleted file mode 100644 index 18af94b..0000000 Binary files a/recipe/tests/data/TM_WORLD_BORDERS_SIMPL-0.3/TM_WORLD_BORDERS_SIMPL-0.3.shx and /dev/null differ diff --git a/recipe/tests/data/cape_cod_tmax.nc b/recipe/tests/data/cape_cod_tmax.nc deleted file mode 100644 index e1c0f84..0000000 Binary files a/recipe/tests/data/cape_cod_tmax.nc and /dev/null differ diff --git a/recipe/tests/data/cape_cod_wghts.csv b/recipe/tests/data/cape_cod_wghts.csv deleted file mode 100644 index 5e50af9..0000000 --- a/recipe/tests/data/cape_cod_wghts.csv +++ /dev/null @@ -1,78 +0,0 @@ -hru_id_nat,i,j,wght 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"6fd04c86-82b8-466f-81df-0a53926fa420", - "metadata": {}, - "outputs": [], - "source": [ - "import fsspec\n", - "import xarray as xr\n", - "import hvplot.xarray\n", - "import hvplot.pandas\n", - "import hvplot.dask\n", - "# import intake\n", - "import os\n", - "import warnings\n", - "# import intake_xarray\n", - "import geopandas as gpd\n", - "from pynhd import NLDI, WaterData\n", - "# from dask.distributed import LocalCluster, Client\n", - "# from gdptools.helpers import get_shp_bounds_w_buffer, build_subset\n", - "# from helpers import configure_cluster\n", - "\n", - "warnings.filterwarnings('ignore')" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "id": "edf27719-ce97-4d35-a7b0-8065b26874f7", - "metadata": {}, - "outputs": [], - "source": [ - "# USGS gage 01482100 Delaware River at Del Mem Bridge at Wilmington De\n", - "gage_id = '01482100'\n", - "nldi = NLDI()\n", - "del_basins = nldi.get_basins(gage_id)\n", - "huc12_basins = WaterData('huc12').bygeom(del_basins.geometry[0])\n", - "\n", - "import pandas as pd\n", - "param_json = \"https://mikejohnson51.github.io/opendap.catalog/cat_params.json\"\n", - "grid_json = \"https://mikejohnson51.github.io/opendap.catalog/cat_grids.json\"\n", - "params = pd.read_json(param_json)\n", - "grids = pd.read_json(grid_json)\n", - "\n", - "_id = \"gridmet\"\n", - "_varname = \"daily_maximum_temperature\"\n", - "tc = params.query(\"id == @_id & varname == @_varname\")\n", - "print(type(tc), len(tc))\n", - "tc" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "id": "7d819411-bb81-46e2-8305-42f9f2c396d1", - "metadata": {}, - "outputs": [], - "source": [ - "# Create a dictionary of parameter dataframes for each variable\n", - "vars = [\"tmmn\", \"tmmx\"]\n", - "var_params = []\n", - "for var in vars:\n", - " var_params.append(params.query(\"id == @_id & variable == @var\"))\n", - "param_dict = dict(zip(vars, var_params))\n", - "param_dict.get('tmmn')" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "id": "0d1876e8-4b97-49eb-8d72-0f97843fef3b", - "metadata": {}, - "outputs": [], - "source": [ - "# Create a dictionary of grid dataframes for each variable\n", - "var_grid = []\n", - "for var in vars:\n", - " gridid = param_dict.get(var)['grid_id'].values[0]\n", - " var_grid.append(grids.query('grid_id == @gridid'))\n", - "grid_dict = dict(zip(vars, var_grid))\n", - "grid_dict.get('tmmn')" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "id": "75be1872-a9c1-42b1-84d4-eaf85e9d63d1", - "metadata": {}, - "outputs": [], - "source": [ - "import tempfile\n", - "from gdptools.helpers import calc_weights_catalog\n", - "wghtf = calc_weights_catalog(\n", - " params_json=param_dict.get(\"tmmn\"),\n", - " grid_json=grid_dict.get(\"tmmn\"),\n", - " shp_file=huc12_basins,\n", - " shp_poly_idx='huc12',\n", - " wght_gen_file=tempfile.NamedTemporaryFile().name,\n", - " wght_gen_proj=6931,\n", - " )\n", - "\n", - "tmp = 0" - ] - }, - { - "cell_type": "code", - "execution_count": null, - "id": "70139be4-efcd-4d47-9302-0142b7990cb4", - "metadata": {}, - "outputs": [], - "source": [ - "from gdptools.run_weights_engine import RunWghtEngine\n", - "eng = RunWghtEngine()\n", - "eng.initialize(\n", - " param_dict=param_dict,\n", - " grid_dict=grid_dict,\n", - " wghts=wghtf,\n", - " gdf=huc12_basins,\n", - " gdf_poly_idx='huc12',\n", - " start_date=\"2020-01-01\",\n", - " end_date=\"2020-01-07\"\n", - ")\n", - "ngdf, nvals = eng.run(numdiv=1) " - ] - }, - { - "cell_type": "code", - "execution_count": null, - "id": "36812590-fb33-4162-bf22-f6455bea4ee8", - "metadata": {}, - "outputs": [], - "source": [] - } - ], - "metadata": { - "kernelspec": { - "display_name": "Python 3.9.13", - "language": "python", - "name": "python3" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 3 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython3", - "version": "3.9.13" - }, - "vscode": { - "interpreter": { - "hash": "3365295dbac4842fc2bf269a7ec44c70d326e0f953d0b638b14de2730fd8846e" - } - } - }, - "nbformat": 4, - "nbformat_minor": 5 -} diff --git a/recipe/tests/data/hru_1210.cpg b/recipe/tests/data/hru_1210.cpg deleted file mode 100644 index 7edc66b..0000000 --- a/recipe/tests/data/hru_1210.cpg +++ /dev/null @@ -1 +0,0 @@ -UTF-8 diff --git a/recipe/tests/data/hru_1210.dbf b/recipe/tests/data/hru_1210.dbf deleted file mode 100644 index 3919b8b..0000000 Binary files a/recipe/tests/data/hru_1210.dbf and /dev/null differ diff --git a/recipe/tests/data/hru_1210.prj b/recipe/tests/data/hru_1210.prj deleted file mode 100644 index be961b9..0000000 --- a/recipe/tests/data/hru_1210.prj +++ /dev/null @@ -1 +0,0 @@ -PROJCS["USA_Contiguous_Albers_Equal_Area_Conic_USGS_version",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-96.0],PARAMETER["Standard_Parallel_1",29.5],PARAMETER["Standard_Parallel_2",45.5],PARAMETER["Latitude_Of_Origin",23.0],UNIT["Meter",1.0]] diff --git a/recipe/tests/data/hru_1210.qmd b/recipe/tests/data/hru_1210.qmd deleted file mode 100644 index e45f3ec..0000000 --- a/recipe/tests/data/hru_1210.qmd +++ /dev/null @@ -1,26 +0,0 @@ - - - - - - dataset - - - - - - - - - - 0 - 0 - - - - - false - - - - diff --git a/recipe/tests/data/hru_1210.shp b/recipe/tests/data/hru_1210.shp deleted file mode 100644 index 520ea0e..0000000 Binary files a/recipe/tests/data/hru_1210.shp and /dev/null differ diff --git a/recipe/tests/data/hru_1210.shx b/recipe/tests/data/hru_1210.shx deleted file mode 100644 index 4fe78d0..0000000 Binary files a/recipe/tests/data/hru_1210.shx and /dev/null differ diff --git a/recipe/tests/data/hru_1217.cpg b/recipe/tests/data/hru_1217.cpg deleted file mode 100644 index 7edc66b..0000000 --- a/recipe/tests/data/hru_1217.cpg +++ /dev/null @@ -1 +0,0 @@ -UTF-8 diff --git a/recipe/tests/data/hru_1217.dbf b/recipe/tests/data/hru_1217.dbf deleted file mode 100644 index 4e264be..0000000 Binary files a/recipe/tests/data/hru_1217.dbf and /dev/null differ diff --git a/recipe/tests/data/hru_1217.prj b/recipe/tests/data/hru_1217.prj deleted file mode 100644 index be961b9..0000000 --- a/recipe/tests/data/hru_1217.prj +++ /dev/null @@ -1 +0,0 @@ -PROJCS["USA_Contiguous_Albers_Equal_Area_Conic_USGS_version",GEOGCS["GCS_North_American_1983",DATUM["D_North_American_1983",SPHEROID["GRS_1980",6378137.0,298.257222101]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]],PROJECTION["Albers"],PARAMETER["False_Easting",0.0],PARAMETER["False_Northing",0.0],PARAMETER["Central_Meridian",-96.0],PARAMETER["Standard_Parallel_1",29.5],PARAMETER["Standard_Parallel_2",45.5],PARAMETER["Latitude_Of_Origin",23.0],UNIT["Meter",1.0]] diff --git a/recipe/tests/data/hru_1217.qmd b/recipe/tests/data/hru_1217.qmd deleted file mode 100644 index e45f3ec..0000000 --- a/recipe/tests/data/hru_1217.qmd +++ /dev/null @@ -1,26 +0,0 @@ - - - - - - dataset - - - - - - - - - - 0 - 0 - - - - - false - - - - diff --git a/recipe/tests/data/hru_1217.shp b/recipe/tests/data/hru_1217.shp deleted file mode 100644 index 35d3a0b..0000000 Binary files a/recipe/tests/data/hru_1217.shp and /dev/null differ diff --git a/recipe/tests/data/hru_1217.shx b/recipe/tests/data/hru_1217.shx deleted file mode 100644 index 5cab040..0000000 Binary files a/recipe/tests/data/hru_1217.shx and /dev/null differ diff --git a/recipe/tests/data/test_easy.cpg b/recipe/tests/data/test_easy.cpg deleted file mode 100644 index 7edc66b..0000000 --- a/recipe/tests/data/test_easy.cpg +++ /dev/null @@ -1 +0,0 @@ -UTF-8 diff --git a/recipe/tests/data/test_easy.dbf b/recipe/tests/data/test_easy.dbf deleted file mode 100644 index 1d8cedd..0000000 Binary files a/recipe/tests/data/test_easy.dbf and /dev/null differ diff --git a/recipe/tests/data/test_easy.prj b/recipe/tests/data/test_easy.prj deleted file mode 100644 index 0ae685b..0000000 --- a/recipe/tests/data/test_easy.prj +++ /dev/null @@ -1 +0,0 @@ -GEOGCS["GCS_WGS_1984",DATUM["D_WGS_1984",SPHEROID["WGS_1984",6378137.0,298.257223563]],PRIMEM["Greenwich",0.0],UNIT["Degree",0.0174532925199433]] diff --git a/recipe/tests/data/test_easy.qmd b/recipe/tests/data/test_easy.qmd deleted file mode 100644 index b66ad0f..0000000 --- a/recipe/tests/data/test_easy.qmd +++ /dev/null @@ -1,43 +0,0 @@ - - - - - - dataset - - - - - - - - - - - - - - - - - - - 0 - 0 - - - - - false - - - - - - - - - - - - diff --git a/recipe/tests/data/test_easy.shp b/recipe/tests/data/test_easy.shp deleted file mode 100644 index 190a390..0000000 Binary files a/recipe/tests/data/test_easy.shp and /dev/null differ diff --git a/recipe/tests/data/test_easy.shx b/recipe/tests/data/test_easy.shx deleted file mode 100644 index a4b9e41..0000000 Binary files a/recipe/tests/data/test_easy.shx and /dev/null differ diff --git a/recipe/tests/data/wght_cat_cape_cod.csv b/recipe/tests/data/wght_cat_cape_cod.csv deleted file mode 100644 index 179575e..0000000 --- a/recipe/tests/data/wght_cat_cape_cod.csv +++ /dev/null @@ -1,95 +0,0 @@ -,hru_id_nat,i,j,wght -0,1217,9,21,0.010385113453602842 -1,1217,8,21,0.003508973537762682 -2,1217,9,20,0.022090459915468343 -3,1217,8,20,0.020671836365909205 -4,1217,9,19,0.02271996923093199 -5,1217,8,19,0.0058229364058856765 -6,1217,9,18,0.013130850948726316 -7,1217,7,21,0.002499708961998342 -8,1217,7,20,0.02509912823800202 -9,1217,6,20,0.01907290544540379 -10,1217,7,19,0.007056794046585599 -11,1217,6,19,0.007743171650448804 -12,1217,5,19,0.02343208521623885 -13,1217,5,20,0.008358360009321298 -14,1217,4,20,5.6304754023110946e-05 -15,1217,4,19,0.018038942623158215 -16,1217,3,19,0.002082110439914532 -17,1217,4,18,0.024177247306878126 -18,1217,7,18,3.058806916741606e-05 -19,1217,6,18,0.003133768911694372 -20,1217,5,18,0.01978963322082683 -21,1217,3,18,0.020592573781125896 -22,1217,2,18,0.0006779503538345632 -23,1217,4,17,0.00021576524621362992 -24,1217,3,17,0.00797284270189162 -25,1217,2,17,0.009323334115058987 -26,1217,2,16,0.009768515305339655 -27,1217,3,15,0.005075664829726569 -28,1217,2,15,0.01743384274228927 -29,1217,3,14,0.0022756226309730244 -30,1217,2,14,0.01442984758966935 -31,1217,12,21,0.002418114956077962 -32,1217,11,21,0.005944155635677215 -33,1217,10,21,0.0030931603519837817 -34,1217,11,20,0.022762084768619167 -35,1217,10,20,0.010084165757596571 -36,1217,11,19,0.024608163241500173 -37,1217,10,19,0.01787644564343566 -38,1217,11,18,0.014923935364042525 -39,1217,12,20,0.006536717433879459 -40,1217,12,19,0.0009529187233115947 -41,1217,12,18,0.0036493919105850176 -42,1217,12,17,0.0031233321508102496 -43,1217,10,18,0.003938599372807205 -44,1217,10,17,0.01583026756714666 -45,1217,9,17,0.0068161788051025705 -46,1217,10,16,0.020942460541649045 -47,1217,9,16,0.002562250969507334 -48,1217,10,15,0.013969186760700913 -49,1217,9,15,0.00015357587823515385 -50,1217,11,17,0.002309316633566189 -51,1217,11,16,0.0008031353112737044 -52,1217,11,14,0.004008510213053036 -53,1217,10,14,0.01430469320305944 -54,1217,11,13,0.009482736241314193 -55,1217,10,13,0.0024214527631840465 -56,1217,11,12,0.012429001451739542 -57,1217,10,12,0.006927664633561424 -58,1217,11,11,0.015252125133789787 -59,1217,10,11,0.012474795340704148 -60,1217,10,10,0.01743436239008998 -61,1217,10,9,0.022524074494531237 -62,1217,9,9,0.00011695690400420476 -63,1217,10,8,0.020419512554429007 -64,1217,11,10,0.012463668266503875 -65,1217,11,9,0.0016145023958267295 -66,1217,11,8,7.190817319719135e-05 -67,1217,11,7,0.0007142824231105722 -68,1217,10,6,0.0020928772251331764 -69,1217,9,8,0.0062604598757939065 -70,1217,10,7,0.02123177604161553 -71,1217,9,7,0.021592198036589162 -72,1217,8,7,0.0015857604617338804 -73,1217,9,6,0.018835090571409606 -74,1217,8,6,0.023471986923080997 -75,1217,9,5,0.00023870638976033662 -76,1217,8,5,0.0038741797919178036 -77,1217,7,7,0.0044579421384705635 -78,1217,6,7,0.0011460055994972607 -79,1217,7,6,0.025232954953369958 -80,1217,6,6,0.022937590033638138 -81,1217,7,5,0.01237675581737259 -82,1217,6,5,0.02488293379972019 -83,1217,5,5,0.014798783786828095 -84,1217,6,4,0.02349295723714499 -85,1217,7,4,0.0010609558457634189 -86,1217,5,4,0.018009192964290276 -87,1217,6,3,0.011688343114585689 -88,1217,5,3,0.02413199781462915 -89,1217,5,2,0.006115341450878622 -90,1217,4,2,0.009725631408042223 -91,1217,5,6,0.007927047239565093 -92,1217,4,4,0.0005700874784422043 -93,1217,4,3,0.009637791593042252 diff --git a/recipe/tests/support.py b/recipe/tests/support.py deleted file mode 100644 index 1aa574d..0000000 --- a/recipe/tests/support.py +++ /dev/null @@ -1,15 +0,0 @@ -"""Typeguard support for tests.""" -import pytest - -try: - import typeguard # noqa: F401 -except ImportError: - has_typeguard = False -else: - has_typeguard = True - - -skip_if_typeguard = pytest.mark.skipif( - has_typeguard, - reason="Broken if Typeguard is enabled", -) diff --git a/recipe/tests/test_RWE_Class.py b/recipe/tests/test_RWE_Class.py deleted file mode 100644 index 7ed66ed..0000000 --- a/recipe/tests/test_RWE_Class.py +++ /dev/null @@ -1,138 +0,0 @@ -"""Testing ancillary functions.""" -from typing import Any - -import geopandas as gpd -import numpy as np -import numpy.typing as npt -import pandas as pd -import pytest -import xarray as xr -from pyproj.crs import CRS -from pyproj.exceptions import CRSError - -from gdptools.ancillary import _check_for_intersection -from gdptools.ancillary import _generate_weights_pershp -from gdptools.ancillary import _get_cells_poly -from gdptools.ancillary import _get_crs -from gdptools.ancillary import _get_data_via_catalog -from gdptools.ancillary import _get_shp_file -from gdptools.gdp_data_class import CatGrids -from gdptools.gdp_data_class import CatParams - - -@pytest.mark.parametrize( - "crs", - [ - "epsg:4326", - 4326, - "+proj=longlat +a=6378137 +f=0.00335281066474748 +pm=0 +no_defs", - ], -) -def test__get_crs(crs: Any) -> None: - """Test the get_crs function.""" - crs = _get_crs(crs) - assert isinstance(crs, CRS) - - -@pytest.mark.parametrize( - "crs", - [ - "espg:4326", - 43, - "+a=6378137 +f=0.00335281066474748 +pm=0 +no_defs", - ], -) -def test__get_bad_crs(crs: Any) -> None: - """Test the get_crs function.""" - with pytest.raises(CRSError): - crs = _get_crs(crs) - - -@pytest.fixture -def param_json() -> pd.DataFrame: - """Return parameter json.""" - param_json = "https://mikejohnson51.github.io/opendap.catalog/cat_params.json" - params = pd.read_json(param_json) - _id = "gridmet" # noqa - _varname = "daily_maximum_temperature" # noqa - return params.query("id == @_id & varname == @_varname") - - -@pytest.fixture -def grid_json() -> pd.DataFrame: - """Return grid json.""" - grid_json = "https://mikejohnson51.github.io/opendap.catalog/cat_grids.json" - grids = pd.read_json(grid_json) - _gridid = 176 # noqa - return grids.query("grid_id == @_gridid") - - -@pytest.fixture -def gdf() -> gpd.GeoDataFrame: - """Create xarray dataset.""" - return gpd.read_file("./tests/data/hru_1210.shp") - - -@pytest.fixture -def catparam(param_json) -> CatParams: - """Return CatParams.""" - return CatParams(**param_json.to_dict("records")[0]) - - -@pytest.fixture -def catgrid(grid_json) -> CatGrids: - """Return CatGrids.""" - return CatGrids(**grid_json.to_dict("records")[0]) - - -@pytest.fixture -def is_degrees(gdf, catparam, catgrid) -> bool: - is_intersect, is_degrees, is_0_360 = _check_for_intersection( - params_json=catparam, grid_json=catgrid, gdf=gdf - ) - return is_degrees - - -@pytest.fixture -def bounds(gdf, catgrid, is_degrees) -> npt.NDArray[np.double]: - """Get bounds.""" - gdf, bounds = _get_shp_file(gdf, catgrid, is_degrees) - return bounds - - -@pytest.fixture -def xarray(catparam, catgrid, bounds) -> xr.Dataset: - """Create xarray dataset.""" - return _get_data_via_catalog(catparam, catgrid, bounds, "2020-01-01") - - -def test__get_cells_poly(catparam, catgrid, bounds) -> None: - """Test _get_cells_poly.""" - ds = _get_data_via_catalog(catparam, catgrid, bounds, "2020-01-01") - assert isinstance(ds, xr.DataArray) - gdf = _get_cells_poly( - xr_a=ds, x=catgrid.X_name, y=catgrid.Y_name, var=catparam.varname, crs_in=4326 - ) - assert isinstance(gdf, gpd.GeoDataFrame) - - -def test__generate_weights_pershape(gdf, catparam, catgrid, bounds) -> None: - """Test _generate_weights_pershape.""" - ds = _get_data_via_catalog(catparam, catgrid, bounds, "2020-01-01") - assert isinstance(ds, xr.DataArray) - grid_cells = _get_cells_poly( - xr_a=ds, - x=catgrid.X_name, - y=catgrid.Y_name, - var=catparam.varname, - crs_in=catgrid.proj, - ) - assert isinstance(grid_cells, gpd.GeoDataFrame) - df = _generate_weights_pershp( - poly=gdf, - poly_idx="hru_id_nat", - grid_cells=grid_cells, - grid_cells_crs=catgrid.proj, - wght_gen_crs=6931, - ) - assert isinstance(df, pd.DataFrame) diff --git a/recipe/tests/test_ancillary.py b/recipe/tests/test_ancillary.py deleted file mode 100644 index fa5c945..0000000 --- a/recipe/tests/test_ancillary.py +++ /dev/null @@ -1,128 +0,0 @@ -"""Testing ancillary functions.""" -from typing import Any - -import geopandas as gpd -import numpy as np -import numpy.typing as npt -import pandas as pd -import pytest -import xarray as xr -from pyproj.crs import CRS -from pyproj.exceptions import CRSError - -from gdptools.ancillary import _check_for_intersection -from gdptools.ancillary import _generate_weights_pershp -from gdptools.ancillary import _get_cells_poly -from gdptools.ancillary import _get_crs -from gdptools.ancillary import _get_data_via_catalog -from gdptools.ancillary import _get_shp_file -from gdptools.gdp_data_class import CatGrids -from gdptools.gdp_data_class import CatParams - - -@pytest.mark.parametrize( - "crs", - [ - "epsg:4326", - 4326, - "+proj=longlat +a=6378137 +f=0.00335281066474748 +pm=0 +no_defs", - ], -) -def test__get_crs(crs: Any) -> None: - """Test the get_crs function.""" - crs = _get_crs(crs) - assert isinstance(crs, CRS) - - -@pytest.mark.parametrize( - "crs", - [ - "espg:4326", - 43, - "+a=6378137 +f=0.00335281066474748 +pm=0 +no_defs", - ], -) -def test__get_bad_crs(crs: Any) -> None: - """Test the get_crs function.""" - with pytest.raises(CRSError): - crs = _get_crs(crs) - - -@pytest.fixture -def catparam() -> CatParams: - """Return parameter json.""" - param_json = "https://mikejohnson51.github.io/opendap.catalog/cat_params.json" - params = pd.read_json(param_json) - _id = "gridmet" # noqa - _varname = "daily_maximum_temperature" # noqa - tc = params.query("id == @_id & varname == @_varname") - return CatParams(**tc.to_dict("records")[0]) - - -@pytest.fixture -def catgrid() -> CatGrids: - """Return grid json.""" - grid_json = "https://mikejohnson51.github.io/opendap.catalog/cat_grids.json" - grids = pd.read_json(grid_json) - _gridid = 176 # noqa - tc = grids.query("grid_id == @_gridid") - return CatGrids(**tc.to_dict("records")[0]) - - -@pytest.fixture -def gdf() -> gpd.GeoDataFrame: - """Create xarray dataset.""" - return gpd.read_file("./tests/data/hru_1210.shp") - - -@pytest.fixture -def is_degrees(gdf, catparam, catgrid) -> bool: - is_intersect, is_degrees, is_0_360 = _check_for_intersection( - params_json=catparam, grid_json=catgrid, gdf=gdf - ) - return is_degrees - -@pytest.fixture -def bounds(gdf, catgrid, is_degrees) -> npt.NDArray[np.double]: - """Get bounds.""" - gdf, bounds = _get_shp_file(gdf, catgrid, is_degrees) - return bounds - - -@pytest.fixture -def xarray(catparam, catgrid, bounds) -> xr.Dataset: - """Create xarray dataset.""" - return _get_data_via_catalog(catparam, catgrid, bounds, "2020-01-01") - - -def test__get_cells_poly(catparam, catgrid, bounds) -> None: - """Test _get_cells_poly.""" - ds = _get_data_via_catalog(catparam, catgrid, bounds, "2020-01-01") - print(ds) - assert isinstance(ds, xr.DataArray) - gdf = _get_cells_poly( - xr_a=ds, x="lon", y="lat", var="daily_maximum_temperature", crs_in=4326 - ) - assert isinstance(gdf, gpd.GeoDataFrame) - - -def test__generate_weights_pershape(gdf, catparam, catgrid, bounds) -> None: - """Test _generate_weights_pershape.""" - ds = _get_data_via_catalog(catparam, catgrid, bounds, "2020-01-01") - assert isinstance(ds, xr.DataArray) - grid_cells = _get_cells_poly( - xr_a=ds, - x="lon", - y="lat", - var="daily_maximum_temperature", - crs_in=catgrid.proj, - ) - assert isinstance(grid_cells, gpd.GeoDataFrame) - df = _generate_weights_pershp( - poly=gdf, - poly_idx="hru_id_nat", - grid_cells=grid_cells, - grid_cells_crs=catgrid.proj, - wght_gen_crs=6931, - ) - assert isinstance(df, pd.DataFrame) diff --git a/recipe/tests/test_main.py b/recipe/tests/test_main.py deleted file mode 100644 index da38b9d..0000000 --- a/recipe/tests/test_main.py +++ /dev/null @@ -1,17 +0,0 @@ -"""Test cases for the __main__ module.""" -import pytest -from click.testing import CliRunner - -from gdptools import __main__ - - -@pytest.fixture -def runner() -> CliRunner: - """Fixture for invoking command-line interfaces.""" - return CliRunner() - - -def test_main_succeeds(runner: CliRunner) -> None: - """It exits with a status code of zero.""" - result = runner.invoke(__main__.main) - assert result.exit_code == 0 diff --git a/recipe/tests/test_run_wght_engine.py b/recipe/tests/test_run_wght_engine.py deleted file mode 100644 index 54e058e..0000000 --- a/recipe/tests/test_run_wght_engine.py +++ /dev/null @@ -1,127 +0,0 @@ -"""Testing run_wght_engine functions.""" -from pathlib import Path -from tempfile import TemporaryDirectory -from typing import Dict - -import geopandas as gpd -import numpy as np -import pandas as pd -import pytest - -from gdptools.gdp_data_class import CatGrids -from gdptools.gdp_data_class import CatParams -from gdptools.helpers import calc_weights_catalog -from gdptools.run_weights_engine import RunWghtEngine - -# from .support import skip_if_typeguard - -gm_vars = ["aet", "pet", "PDSI"] - - -@pytest.fixture -def param_dict(vars=gm_vars) -> Dict: - """Return parameter json.""" - param_json = "https://mikejohnson51.github.io/opendap.catalog/cat_params.json" - params = pd.read_json(param_json) - _id = "terraclim" # noqa - var_params = [ - params.query( - "id == @_id & variable == @_var", local_dict={"_id": _id, "_var": _var} - ) - for _var in vars - ] - return dict(zip(vars, var_params)) - - -@pytest.fixture -def grid_dict(vars=gm_vars) -> Dict: - """Return grid json.""" - grid_json = "https://mikejohnson51.github.io/opendap.catalog/cat_grids.json" - grids = pd.read_json(grid_json) - _gridid = 116 # noqa - var_grid = [ - grids.query( - "grid_id == @_gridid", local_dict={"_gridid": _gridid, "_var": _var} - ) - for _var in vars - ] - return dict(zip(vars, var_grid)) - - -@pytest.fixture -def gdf() -> gpd.GeoDataFrame: - """Create xarray dataset.""" - return gpd.read_file("./tests/data/hru_1210.shp") - - -@pytest.fixture -def poly_idx() -> str: - """Return poly_idx.""" - return "hru_id_nat" - - -@pytest.fixture -def wght_gen_proj() -> int: - """Return wght gen projection.""" - return 6931 - - -# @skip_if_typeguard -def test__rwe( - param_dict, grid_dict, gdf, poly_idx, wght_gen_proj, tvars=gm_vars -) -> None: - """Test rwe.""" - cp = CatParams(**param_dict.get(tvars[0]).to_dict("records")[0]) - cg = CatGrids(**grid_dict.get(tvars[0]).to_dict("records")[0]) - wghtf = calc_weights_catalog( - params_json=cp, - grid_json=cg, - shp_file=gdf, - shp_poly_idx=poly_idx, - wght_gen_proj=wght_gen_proj, - ) - assert isinstance(wghtf, pd.DataFrame) - - eng = RunWghtEngine() - - eng.initialize( - param_dict=param_dict, - grid_dict=grid_dict, - wghts=wghtf, - gdf=gdf, - gdf_poly_idx=poly_idx, - start_date="1980-01-01", - end_date="1980-12-31", - ) - - ngdf, nvals = eng.run(numdiv=1) - - test_arr = np.asarray( - [ - [3.5844913], - [0.0], - [43.21665], - [68.13543], - [83.542114], - [93.33581], - [49.084114], - [35.92661], - [26.799622], - [63.00365], - [50.600002], - [1.9948304], - ] - ) - - np.testing.assert_allclose(test_arr, nvals[0]) - - with TemporaryDirectory() as tmpdirname: - success = eng.finalize( - gdf=ngdf, - vals=nvals, - p_opath=tmpdirname, - prefix="terraclimetest", - ) - file = Path(tmpdirname) / "terraclimetest.nc" - assert success - assert file.exists()