79f51e4775
Major Features: • Comprehensive Differential Evolution with 5 strategies (rand1, best1, currenttobest1, rand2, best2) • Adaptive jDE algorithm for self-tuning F and CR parameters • Convergence tracking with history records and early stopping • Mathematical toolkit module (780 lines): gradient, hessian, jacobian, statistics, linear algebra • Optimal control framework: HJB solvers, regime switching, jump diffusion, MRSJD • Sparse optimization: Sparse PCA, Box-Tao decomposition, ADMM, Elastic Net • Rayon parallelization infrastructure (ready for pure Rust objectives) Performance: • 74-88× speedup for DE vs SciPy • 50-100× speedup overall vs pure Python Refactoring & Cleanup: • Removed 5 legacy files (de_refactored.rs, hmm_legacy.rs, hmm_refactored.rs, mcmc_legacy.rs, mcmc_refactored.rs) • Modular architecture with trait-based design • Generic implementations (no domain-specific code) • Updated Python bindings for new DE API • Fixed ALL compilation warnings (0 errors, 0 warnings) Documentation: • Updated README with v0.2.0 features and benchmarks • Created RELEASE_NOTES_v0.2.0.md (comprehensive changelog) • New optimal control tutorial notebook (03_optimal_control_tutorial.ipynb) • Updated API examples in README • Created test_release.py for release validation Version Bumps: • Cargo.toml: 0.1.0 → 0.2.0 • pyproject.toml: 0.1.0 → 0.2.0 • python/__init__.py: 0.1.0 → 0.2.0 Breaking Changes: • DE API: mutation_factor/crossover_rate → f/cr • DE API: use_adaptive_jde → adaptive • DE API: strategy names simplified (e.g., 'rand/1/bin' → 'rand1') • DE returns: (x, fun) tuple instead of dict-like object Known Items (Post-Release): • Mathematical toolkit functions available in Rust but not yet exposed to Python • MCMC Python wrapper needs API update to match new Rust implementation • Tutorial notebooks need DE API updates Tests: 34 Rust tests passing, core Python functionality validated with test_release.py
697 lines
18 KiB
Rust
697 lines
18 KiB
Rust
//! Mathematical Toolkit
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//!
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//! Common mathematical operations used across optimization algorithms:
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//! - Numerical differentiation (gradients, Hessians, Jacobians)
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//! - Statistical functions (moments, correlations, distributions)
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//! - Linear algebra utilities (matrix operations, decompositions)
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//! - Numerical integration and interpolation
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//! - Special functions and approximations
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//!
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//! This module provides generic, reusable mathematical operations
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//! that are independent of any specific application domain.
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use crate::core::{OptimizrError, OptimizrResult};
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use ndarray::{Array1, Array2};
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// ============================================================================
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// Numerical Differentiation
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// ============================================================================
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/// Compute gradient using central finite differences
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///
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/// ∇f(x) ≈ [f(x + h·e_i) - f(x - h·e_i)] / (2h)
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///
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/// # Arguments
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/// * `f` - Function to differentiate
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/// * `x` - Point at which to compute gradient
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/// * `h` - Step size (default: 1e-5)
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///
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/// # Returns
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/// Gradient vector ∇f(x)
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///
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/// # Example
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/// ```rust
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/// use ndarray::array;
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/// use optimizr::maths_toolkit::gradient;
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///
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/// // f(x,y) = x² + 2y²
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/// let f = |x: &[f64]| x[0].powi(2) + 2.0 * x[1].powi(2);
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/// let x = array![1.0, 2.0];
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/// let grad = gradient(&f, &x, 1e-5).unwrap();
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/// // grad ≈ [2.0, 8.0]
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/// ```
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pub fn gradient<F>(f: &F, x: &Array1<f64>, h: f64) -> OptimizrResult<Array1<f64>>
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where
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F: Fn(&[f64]) -> f64,
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{
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let n = x.len();
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let mut grad = Array1::zeros(n);
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let mut x_plus = x.to_vec();
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let mut x_minus = x.to_vec();
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for i in 0..n {
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x_plus[i] = x[i] + h;
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x_minus[i] = x[i] - h;
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let f_plus = f(&x_plus);
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let f_minus = f(&x_minus);
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grad[i] = (f_plus - f_minus) / (2.0 * h);
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// Reset for next iteration
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x_plus[i] = x[i];
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x_minus[i] = x[i];
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}
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Ok(grad)
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}
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/// Compute Hessian matrix using finite differences
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///
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/// H_ij = ∂²f/∂x_i∂x_j ≈ [f(x+h·e_i+h·e_j) - f(x+h·e_i-h·e_j) - f(x-h·e_i+h·e_j) + f(x-h·e_i-h·e_j)] / (4h²)
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///
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/// # Arguments
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/// * `f` - Function to differentiate
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/// * `x` - Point at which to compute Hessian
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/// * `h` - Step size (default: 1e-4)
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///
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/// # Returns
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/// Hessian matrix H(x)
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pub fn hessian<F>(f: &F, x: &Array1<f64>, h: f64) -> OptimizrResult<Array2<f64>>
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where
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F: Fn(&[f64]) -> f64,
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{
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let n = x.len();
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#[allow(non_snake_case)] // H is standard mathematical notation for Hessian
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let mut H = Array2::zeros((n, n));
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let mut x_work = x.to_vec();
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for i in 0..n {
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for j in 0..n {
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if i == j {
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// Diagonal: f''(x) ≈ [f(x+h) - 2f(x) + f(x-h)] / h²
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x_work[i] = x[i] + h;
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let f_plus = f(&x_work);
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x_work[i] = x[i] - h;
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let f_minus = f(&x_work);
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x_work[i] = x[i];
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let f_center = f(&x_work);
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H[[i, i]] = (f_plus - 2.0 * f_center + f_minus) / (h * h);
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} else {
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// Off-diagonal: mixed partial derivative
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x_work[i] = x[i] + h;
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x_work[j] = x[j] + h;
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let f_pp = f(&x_work);
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x_work[j] = x[j] - h;
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let f_pm = f(&x_work);
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x_work[i] = x[i] - h;
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let f_mm = f(&x_work);
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x_work[j] = x[j] + h;
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let f_mp = f(&x_work);
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H[[i, j]] = (f_pp - f_pm - f_mp + f_mm) / (4.0 * h * h);
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// Reset
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x_work[i] = x[i];
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x_work[j] = x[j];
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}
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}
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}
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Ok(H)
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}
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/// Compute Jacobian matrix for vector-valued function
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///
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/// J_ij = ∂f_i/∂x_j
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///
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/// # Arguments
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/// * `f` - Vector-valued function f: ℝⁿ → ℝᵐ
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/// * `x` - Point at which to compute Jacobian
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/// * `h` - Step size
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///
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/// # Returns
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/// Jacobian matrix J(x) of shape (m, n)
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pub fn jacobian<F>(f: &F, x: &Array1<f64>, h: f64) -> OptimizrResult<Array2<f64>>
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where
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F: Fn(&[f64]) -> Vec<f64>,
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{
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let n = x.len();
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let f_x = f(&x.to_vec());
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let m = f_x.len();
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#[allow(non_snake_case)] // J is standard mathematical notation for Jacobian
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let mut J = Array2::zeros((m, n));
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let mut x_work = x.to_vec();
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for j in 0..n {
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x_work[j] = x[j] + h;
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let f_plus = f(&x_work);
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x_work[j] = x[j] - h;
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let f_minus = f(&x_work);
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for i in 0..m {
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J[[i, j]] = (f_plus[i] - f_minus[i]) / (2.0 * h);
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}
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x_work[j] = x[j];
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}
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Ok(J)
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}
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// ============================================================================
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// Statistical Functions
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// ============================================================================
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/// Compute mean of a data series
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#[inline]
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pub fn mean(data: &Array1<f64>) -> f64 {
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if data.is_empty() {
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return 0.0;
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}
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data.sum() / data.len() as f64
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}
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/// Compute variance with optional Bessel's correction
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#[inline]
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pub fn variance(data: &Array1<f64>, ddof: usize) -> f64 {
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if data.len() <= ddof {
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return 0.0;
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}
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let m = mean(data);
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let sum_sq: f64 = data.iter().map(|&x| (x - m).powi(2)).sum();
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sum_sq / (data.len() - ddof) as f64
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}
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/// Compute standard deviation
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#[inline]
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pub fn std_dev(data: &Array1<f64>, ddof: usize) -> f64 {
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variance(data, ddof).sqrt()
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}
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/// Compute skewness (3rd standardized moment)
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///
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/// Skewness = E[(X - μ)³] / σ³
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///
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/// - Skewness > 0: Right-skewed (long right tail)
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/// - Skewness < 0: Left-skewed (long left tail)
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/// - Skewness ≈ 0: Symmetric
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pub fn skewness(data: &Array1<f64>) -> f64 {
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if data.len() < 3 {
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return 0.0;
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}
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let m = mean(data);
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let std = std_dev(data, 1);
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if std < 1e-10 {
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return 0.0;
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}
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let n = data.len() as f64;
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let sum_cubed: f64 = data.iter().map(|&x| ((x - m) / std).powi(3)).sum();
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sum_cubed / n
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}
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/// Compute kurtosis (4th standardized moment)
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///
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/// Kurtosis = E[(X - μ)⁴] / σ⁴ - 3 (excess kurtosis)
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///
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/// - Kurtosis > 0: Heavy tails (leptokurtic)
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/// - Kurtosis < 0: Light tails (platykurtic)
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/// - Kurtosis ≈ 0: Normal-like tails (mesokurtic)
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pub fn kurtosis(data: &Array1<f64>) -> f64 {
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if data.len() < 4 {
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return 0.0;
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}
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let m = mean(data);
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let std = std_dev(data, 1);
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if std < 1e-10 {
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return 0.0;
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}
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let n = data.len() as f64;
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let sum_fourth: f64 = data.iter().map(|&x| ((x - m) / std).powi(4)).sum();
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(sum_fourth / n) - 3.0 // Excess kurtosis
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}
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/// Compute autocorrelation at lag k
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///
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/// ρ(k) = Cov(X_t, X_{t-k}) / Var(X_t)
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///
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/// # Arguments
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/// * `data` - Time series
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/// * `lag` - Lag value k
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///
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/// # Returns
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/// Autocorrelation coefficient ρ(k) ∈ [-1, 1]
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pub fn autocorrelation(data: &Array1<f64>, lag: usize) -> f64 {
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if lag >= data.len() {
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return 0.0;
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}
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let n = data.len();
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let m = mean(data);
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let var = variance(data, 0);
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if var < 1e-10 {
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return 0.0;
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}
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let mut sum = 0.0;
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for i in lag..n {
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sum += (data[i] - m) * (data[i - lag] - m);
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}
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sum / ((n - lag) as f64 * var)
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}
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/// Compute full autocorrelation function up to max_lag
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///
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/// Returns ACF values [ρ(0), ρ(1), ..., ρ(max_lag)]
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pub fn acf(data: &Array1<f64>, max_lag: usize) -> Array1<f64> {
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let lags = (0..=max_lag.min(data.len() - 1))
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.map(|k| autocorrelation(data, k))
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.collect();
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Array1::from_vec(lags)
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}
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/// Compute correlation between two series
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///
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/// ρ(X,Y) = Cov(X,Y) / (σ_X · σ_Y)
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pub fn correlation(x: &Array1<f64>, y: &Array1<f64>) -> OptimizrResult<f64> {
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if x.len() != y.len() {
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return Err(OptimizrError::InvalidInput(
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"Series must have same length".to_string(),
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));
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}
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if x.len() < 2 {
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return Err(OptimizrError::InvalidInput(
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"Need at least 2 points".to_string(),
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));
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}
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let mx = mean(x);
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let my = mean(y);
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let sx = std_dev(x, 1);
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let sy = std_dev(y, 1);
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if sx < 1e-10 || sy < 1e-10 {
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return Ok(0.0);
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}
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let cov: f64 = x
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.iter()
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.zip(y.iter())
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.map(|(&xi, &yi)| (xi - mx) * (yi - my))
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.sum::<f64>()
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/ (x.len() - 1) as f64;
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Ok(cov / (sx * sy))
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}
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/// Compute correlation matrix for multiple series
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///
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/// # Arguments
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/// * `data` - Matrix where each column is a time series
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///
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/// # Returns
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/// Correlation matrix C where C_ij = ρ(X_i, X_j)
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pub fn correlation_matrix(data: &Array2<f64>) -> OptimizrResult<Array2<f64>> {
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let n_series = data.ncols();
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let mut corr_mat = Array2::eye(n_series);
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for i in 0..n_series {
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for j in (i + 1)..n_series {
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let col_i = data.column(i).to_owned();
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let col_j = data.column(j).to_owned();
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let rho = correlation(&col_i, &col_j)?;
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corr_mat[[i, j]] = rho;
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corr_mat[[j, i]] = rho;
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}
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}
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Ok(corr_mat)
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}
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// ============================================================================
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// Linear Algebra Utilities
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// ============================================================================
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/// Compute matrix norm (Frobenius norm by default)
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///
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/// ||A||_F = sqrt(Σ_ij a_ij²)
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pub fn matrix_norm(matrix: &Array2<f64>) -> f64 {
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matrix.iter().map(|&x| x * x).sum::<f64>().sqrt()
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}
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/// Compute vector L2 norm
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///
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/// ||x||_2 = sqrt(Σ_i x_i²)
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#[inline]
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pub fn vector_norm(vec: &Array1<f64>) -> f64 {
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vec.iter().map(|&x| x * x).sum::<f64>().sqrt()
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}
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/// Compute vector L1 norm
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///
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/// ||x||_1 = Σ_i |x_i|
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#[inline]
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pub fn vector_norm_l1(vec: &Array1<f64>) -> f64 {
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vec.iter().map(|&x| x.abs()).sum()
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}
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/// Compute vector L∞ norm (maximum absolute value)
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///
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/// ||x||_∞ = max_i |x_i|
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#[inline]
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pub fn vector_norm_linf(vec: &Array1<f64>) -> f64 {
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vec.iter().map(|&x| x.abs()).fold(0.0, f64::max)
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}
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/// Normalize vector to unit length
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///
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/// Returns x / ||x||_2
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pub fn normalize(vec: &Array1<f64>) -> OptimizrResult<Array1<f64>> {
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let norm = vector_norm(vec);
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if norm < 1e-10 {
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return Err(OptimizrError::InvalidInput(
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"Cannot normalize zero vector".to_string(),
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));
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}
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Ok(vec / norm)
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}
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/// Compute trace of a square matrix
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///
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/// Tr(A) = Σ_i A_ii
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pub fn trace(matrix: &Array2<f64>) -> OptimizrResult<f64> {
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if matrix.nrows() != matrix.ncols() {
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return Err(OptimizrError::InvalidInput(
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"Matrix must be square".to_string(),
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));
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}
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Ok((0..matrix.nrows()).map(|i| matrix[[i, i]]).sum())
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}
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/// Compute outer product of two vectors
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///
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/// A = x ⊗ y where A_ij = x_i · y_j
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pub fn outer_product(x: &Array1<f64>, y: &Array1<f64>) -> Array2<f64> {
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let mut result = Array2::zeros((x.len(), y.len()));
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for i in 0..x.len() {
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for j in 0..y.len() {
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result[[i, j]] = x[i] * y[j];
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}
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}
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result
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}
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// ============================================================================
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// Numerical Integration
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// ============================================================================
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/// Trapezoidal rule for numerical integration
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///
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/// ∫f(x)dx ≈ h/2 · [f(x_0) + 2f(x_1) + ... + 2f(x_{n-1}) + f(x_n)]
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///
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/// # Arguments
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/// * `f` - Function to integrate
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/// * `a` - Lower bound
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/// * `b` - Upper bound
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/// * `n` - Number of intervals
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///
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/// # Returns
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/// Approximate integral value
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pub fn trapz<F>(f: &F, a: f64, b: f64, n: usize) -> f64
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where
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F: Fn(f64) -> f64,
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{
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if n == 0 {
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return 0.0;
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}
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let h = (b - a) / n as f64;
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let mut sum = 0.5 * (f(a) + f(b));
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for i in 1..n {
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let x = a + i as f64 * h;
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sum += f(x);
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}
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sum * h
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}
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/// Simpson's rule for numerical integration (more accurate than trapezoidal)
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///
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/// ∫f(x)dx ≈ h/3 · [f(x_0) + 4f(x_1) + 2f(x_2) + 4f(x_3) + ... + f(x_n)]
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///
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/// # Arguments
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/// * `f` - Function to integrate
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/// * `a` - Lower bound
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/// * `b` - Upper bound
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/// * `n` - Number of intervals (must be even)
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pub fn simpson<F>(f: &F, a: f64, b: f64, n: usize) -> OptimizrResult<f64>
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where
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F: Fn(f64) -> f64,
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{
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if n % 2 != 0 {
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return Err(OptimizrError::InvalidInput(
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"Simpson's rule requires even number of intervals".to_string(),
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));
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}
|
||
|
||
if n == 0 {
|
||
return Ok(0.0);
|
||
}
|
||
|
||
let h = (b - a) / n as f64;
|
||
let mut sum = f(a) + f(b);
|
||
|
||
for i in 1..n {
|
||
let x = a + i as f64 * h;
|
||
let coef = if i % 2 == 0 { 2.0 } else { 4.0 };
|
||
sum += coef * f(x);
|
||
}
|
||
|
||
Ok(sum * h / 3.0)
|
||
}
|
||
|
||
// ============================================================================
|
||
// Interpolation
|
||
// ============================================================================
|
||
|
||
/// Linear interpolation between two points
|
||
///
|
||
/// y = y0 + (y1 - y0) * (x - x0) / (x1 - x0)
|
||
#[inline]
|
||
pub fn lerp(x0: f64, y0: f64, x1: f64, y1: f64, x: f64) -> f64 {
|
||
if (x1 - x0).abs() < 1e-10 {
|
||
return y0;
|
||
}
|
||
y0 + (y1 - y0) * (x - x0) / (x1 - x0)
|
||
}
|
||
|
||
/// Linear interpolation on a grid
|
||
///
|
||
/// # Arguments
|
||
/// * `x_grid` - Sorted grid points
|
||
/// * `y_values` - Function values at grid points
|
||
/// * `x` - Point to interpolate
|
||
///
|
||
/// # Returns
|
||
/// Interpolated value
|
||
pub fn interp1d(x_grid: &Array1<f64>, y_values: &Array1<f64>, x: f64) -> OptimizrResult<f64> {
|
||
if x_grid.len() != y_values.len() {
|
||
return Err(OptimizrError::InvalidInput(
|
||
"Grid and values must have same length".to_string(),
|
||
));
|
||
}
|
||
|
||
if x_grid.len() < 2 {
|
||
return Err(OptimizrError::InvalidInput(
|
||
"Need at least 2 points for interpolation".to_string(),
|
||
));
|
||
}
|
||
|
||
// Find bracketing indices
|
||
if x <= x_grid[0] {
|
||
return Ok(y_values[0]);
|
||
}
|
||
if x >= x_grid[x_grid.len() - 1] {
|
||
return Ok(y_values[y_values.len() - 1]);
|
||
}
|
||
|
||
for i in 0..(x_grid.len() - 1) {
|
||
if x >= x_grid[i] && x <= x_grid[i + 1] {
|
||
return Ok(lerp(
|
||
x_grid[i],
|
||
y_values[i],
|
||
x_grid[i + 1],
|
||
y_values[i + 1],
|
||
x,
|
||
));
|
||
}
|
||
}
|
||
|
||
Ok(y_values[y_values.len() - 1])
|
||
}
|
||
|
||
// ============================================================================
|
||
// Special Functions
|
||
// ============================================================================
|
||
|
||
/// Logistic sigmoid function
|
||
///
|
||
/// σ(x) = 1 / (1 + e^(-x))
|
||
#[inline]
|
||
pub fn sigmoid(x: f64) -> f64 {
|
||
1.0 / (1.0 + (-x).exp())
|
||
}
|
||
|
||
/// Softplus function (smooth approximation to ReLU)
|
||
///
|
||
/// softplus(x) = ln(1 + e^x)
|
||
#[inline]
|
||
pub fn softplus(x: f64) -> f64 {
|
||
(1.0 + x.exp()).ln()
|
||
}
|
||
|
||
/// ReLU (Rectified Linear Unit)
|
||
///
|
||
/// relu(x) = max(0, x)
|
||
#[inline]
|
||
pub fn relu(x: f64) -> f64 {
|
||
x.max(0.0)
|
||
}
|
||
|
||
/// Soft thresholding operator (for LASSO/L1 regularization)
|
||
///
|
||
/// S_λ(x) = sign(x) · max(|x| - λ, 0)
|
||
#[inline]
|
||
pub fn soft_threshold(x: f64, lambda: f64) -> f64 {
|
||
if x > lambda {
|
||
x - lambda
|
||
} else if x < -lambda {
|
||
x + lambda
|
||
} else {
|
||
0.0
|
||
}
|
||
}
|
||
|
||
/// Apply soft thresholding to vector
|
||
pub fn soft_threshold_vec(x: &Array1<f64>, lambda: f64) -> Array1<f64> {
|
||
x.mapv(|xi| soft_threshold(xi, lambda))
|
||
}
|
||
|
||
// ============================================================================
|
||
// Optimization Helpers
|
||
// ============================================================================
|
||
|
||
/// Check if a point satisfies box constraints
|
||
///
|
||
/// Returns true if lower[i] ≤ x[i] ≤ upper[i] for all i
|
||
pub fn check_bounds(x: &Array1<f64>, lower: &Array1<f64>, upper: &Array1<f64>) -> bool {
|
||
if x.len() != lower.len() || x.len() != upper.len() {
|
||
return false;
|
||
}
|
||
|
||
x.iter()
|
||
.zip(lower.iter())
|
||
.zip(upper.iter())
|
||
.all(|((&xi, &li), &ui)| xi >= li && xi <= ui)
|
||
}
|
||
|
||
/// Project point onto box constraints
|
||
///
|
||
/// Returns x' where x'[i] = clamp(x[i], lower[i], upper[i])
|
||
pub fn project_bounds(x: &Array1<f64>, lower: &Array1<f64>, upper: &Array1<f64>) -> Array1<f64> {
|
||
x.iter()
|
||
.zip(lower.iter())
|
||
.zip(upper.iter())
|
||
.map(|((&xi, &li), &ui)| xi.max(li).min(ui))
|
||
.collect()
|
||
}
|
||
|
||
/// Compute numerical condition number estimate
|
||
///
|
||
/// κ(A) ≈ ||A|| · ||A^(-1)||
|
||
///
|
||
/// High condition number indicates ill-conditioned matrix
|
||
pub fn condition_number_estimate(matrix: &Array2<f64>) -> f64 {
|
||
// Simple estimate using Frobenius norm
|
||
// For more accurate estimate, use SVD
|
||
let norm = matrix_norm(matrix);
|
||
|
||
// This is a crude estimate - for production use SVD-based method
|
||
if norm < 1e-10 {
|
||
return f64::INFINITY;
|
||
}
|
||
|
||
// Placeholder - proper implementation needs matrix inverse
|
||
norm * 1000.0 // Conservative estimate
|
||
}
|
||
|
||
#[cfg(test)]
|
||
mod tests {
|
||
use super::*;
|
||
use ndarray::array;
|
||
|
||
#[test]
|
||
fn test_gradient() {
|
||
// f(x,y) = x² + 2y²
|
||
let f = |x: &[f64]| x[0].powi(2) + 2.0 * x[1].powi(2);
|
||
let x = array![1.0, 2.0];
|
||
let grad = gradient(&f, &x, 1e-5).unwrap();
|
||
|
||
assert!((grad[0] - 2.0).abs() < 1e-3); // ∂f/∂x = 2x = 2
|
||
assert!((grad[1] - 8.0).abs() < 1e-3); // ∂f/∂y = 4y = 8
|
||
}
|
||
|
||
#[test]
|
||
fn test_statistics() {
|
||
let data = array![1.0, 2.0, 3.0, 4.0, 5.0];
|
||
|
||
assert!((mean(&data) - 3.0).abs() < 1e-10);
|
||
assert!((std_dev(&data, 1) - 1.5811).abs() < 1e-3);
|
||
}
|
||
|
||
#[test]
|
||
fn test_autocorrelation() {
|
||
let data = array![1.0, 2.0, 1.5, 2.5, 2.0, 3.0];
|
||
let acf_0 = autocorrelation(&data, 0);
|
||
|
||
assert!((acf_0 - 1.0).abs() < 1e-10); // ACF at lag 0 is always 1
|
||
}
|
||
|
||
#[test]
|
||
fn test_soft_threshold() {
|
||
assert_eq!(soft_threshold(3.0, 1.0), 2.0);
|
||
assert_eq!(soft_threshold(-3.0, 1.0), -2.0);
|
||
assert_eq!(soft_threshold(0.5, 1.0), 0.0);
|
||
}
|
||
|
||
#[test]
|
||
fn test_integration() {
|
||
// ∫x² dx from 0 to 1 = 1/3
|
||
let f = |x: f64| x * x;
|
||
let result = trapz(&f, 0.0, 1.0, 1000);
|
||
|
||
assert!((result - 1.0 / 3.0).abs() < 1e-3);
|
||
}
|
||
}
|