feat(Inference): pipeline wired up (#171)

* feat: Basic pipeline extended.

* feat: Added conversion of model list to existing structure (model_name, model_in_time). Fixed loading of previous models and dicts.

* fix: Had an unfinished function.

* fix: Inference wasn't getting model_over_time. Now transformations are not getting it either yet.

Co-authored-by: Daniel Szemerey <szemereydaniel@gmail.com>
This commit is contained in:
Mark Aron Szulyovszky
2022-01-14 10:34:28 +01:00
committed by GitHub
co-authored by Daniel Szemerey
parent 4aefba33ea
commit 797d45d036
9 changed files with 89 additions and 77 deletions
+9 -6
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@@ -7,10 +7,11 @@ from reporting.types import Reporting
def save_models(all_models_for_all_assets: list[Reporting.Asset], data_config:dict, training_config:dict) -> None: def save_models(all_models_for_all_assets: list[Reporting.Asset], data_config:dict, training_config:dict, model_config:dict) -> None:
dict_for_pickle = dict() dict_for_pickle = dict()
dict_for_pickle['training_config'] = training_config dict_for_pickle['training_config'] = training_config
dict_for_pickle['data_config'] = data_config dict_for_pickle['data_config'] = data_config
dict_for_pickle['model_config'] = model_config
dict_for_pickle['all_models_for_all_assets'] = all_models_for_all_assets dict_for_pickle['all_models_for_all_assets'] = all_models_for_all_assets
date_string = datetime.datetime.now().strftime("%Y-%m-%d-%H-%M") date_string = datetime.datetime.now().strftime("%Y-%m-%d-%H-%M")
@@ -22,7 +23,7 @@ def save_models(all_models_for_all_assets: list[Reporting.Asset], data_config:di
pickle.dump( dict_for_pickle, open( "output/models/{}.p".format(date_string), "wb" ) ) pickle.dump( dict_for_pickle, open( "output/models/{}.p".format(date_string), "wb" ) )
def load_models(file_name:Union[str, None]) -> tuple[dict, dict, dict]: def load_models(file_name:Union[str, None]) -> tuple[list[Reporting.Asset], dict, dict, dict]:
if file_name is None: if file_name is None:
warnings.warn("No file name provided, will load latest models and configurations.") warnings.warn("No file name provided, will load latest models and configurations.")
@@ -31,10 +32,12 @@ def load_models(file_name:Union[str, None]) -> tuple[dict, dict, dict]:
assert len(files_in_directory) > 0, "No models found in output/models." assert len(files_in_directory) > 0, "No models found in output/models."
file_name = sorted(files_in_directory)[-1] file_name = sorted(files_in_directory)[-1]
all_models_for_all_assets = pickle.load( open( "output/models/{}".format(file_name), "rb" ) ) packacked_dict = pickle.load( open( "output/models/{}".format(file_name), "rb" ) )
data_config = all_models_for_all_assets['data_config'] data_config = packacked_dict.pop("data_config", None)
training_config = all_models_for_all_assets['training_config'] training_config = packacked_dict.pop("training_config", None)
model_config = packacked_dict.pop("model_config", None)
all_models_for_all_assets = packacked_dict.pop("all_models_for_all_assets", None)
return all_models_for_all_assets, data_config, training_config return all_models_for_all_assets, data_config, training_config, model_config
+8
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@@ -25,6 +25,14 @@ class Reporting:
self.level: str = level self.level: str = level
self.base: list[Reporting.Single_Model] = [] self.base: list[Reporting.Single_Model] = []
self.metalabeling: list[list[Reporting.Single_Model]] = [] self.metalabeling: list[list[Reporting.Single_Model]] = []
def convert_step_to_tuple(self, step:str)->list[tuple[str, list[Model]]]:
if step == 'base':
return [(x.model_name, x.model_over_time) for x in self.base ]
elif step == 'metalabeling':
return [(x.model_name, x.model_over_time) for sub in self.metalabeling for x in sub]
else:
raise ValueError('Unknown step: {}'.format(step))
class Asset(): class Asset():
+1 -1
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@@ -5,7 +5,7 @@ import pandas as pd
all_results = [] all_results = []
all_predictions = [] all_predictions = []
for index in range(6): for index in range(6):
_, _, _, results_1, predictions_1, _ = run_pipeline(project_name='price-prediction', with_wandb = False, sweep = False, get_config= get_default_ensemble_config) _, _, _, _, results_1, predictions_1, _ = run_pipeline(project_name='price-prediction', with_wandb = False, sweep = False, get_config= get_default_ensemble_config)
all_results.append(results_1) all_results.append(results_1)
all_predictions.append(predictions_1) all_predictions.append(predictions_1)
+4 -4
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@@ -9,12 +9,12 @@ from typing import Callable
def run_inference(preload_models:bool, get_config:Callable): def run_inference(preload_models:bool, get_config:Callable):
if preload_models: if preload_models:
all_models_all_assets, data_config, training_config = load_models(None) all_models_all_assets, data_config, training_config, model_config = load_models(None)
else: else:
all_models_all_assets, data_config, training_config, _, _, _ = run_pipeline(project_name='price-prediction', with_wandb = False, sweep = False, get_config=get_config) all_models_all_assets, data_config, training_config, model_config, _, _, _ = run_pipeline(project_name='price-prediction', with_wandb = False, sweep = False, get_config=get_config)
run_inference_pipeline(data_config, training_config, all_models_all_assets) run_inference_pipeline(data_config, training_config, model_config, all_models_all_assets)
if __name__ == '__main__': if __name__ == '__main__':
run_inference(preload_models=False, get_config=get_lightweight_ensemble_config) run_inference(preload_models=True, get_config=get_lightweight_ensemble_config)
+4 -4
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@@ -20,14 +20,14 @@ import ray
ray.init() ray.init()
def run_pipeline(project_name:str, with_wandb: bool, sweep: bool, get_config: Callable) -> tuple[list[Reporting.Asset], dict, dict, pd.DataFrame, pd.DataFrame, pd.DataFrame]: def run_pipeline(project_name:str, with_wandb: bool, sweep: bool, get_config: Callable) -> tuple[list[Reporting.Asset], dict, dict, dict, pd.DataFrame, pd.DataFrame, pd.DataFrame]:
wandb, model_config, training_config, data_config = __setup_config(project_name, with_wandb, sweep, get_config) wandb, model_config, training_config, data_config = __setup_config(project_name, with_wandb, sweep, get_config)
reporting = __run_training(model_config, training_config, data_config) reporting = __run_training(model_config, training_config, data_config)
results, all_predictions, all_probabilities, all_models_all_assets = reporting.get_results() results, all_predictions, all_probabilities, all_models_all_assets = reporting.get_results()
report_results(results, all_predictions, model_config, wandb, sweep, project_name) report_results(results, all_predictions, model_config, wandb, sweep, project_name)
save_models(all_models_all_assets, data_config, training_config) save_models(all_models_all_assets, data_config, training_config, model_config)
return all_models_all_assets, data_config, training_config, results, all_predictions, all_probabilities return all_models_all_assets, data_config, training_config, model_config, results, all_predictions, all_probabilities
def __setup_config(project_name:str, with_wandb: bool, sweep: bool, get_config: Callable) -> tuple[Optional[object], dict, dict, dict]: def __setup_config(project_name:str, with_wandb: bool, sweep: bool, get_config: Callable) -> tuple[Optional[object], dict, dict, dict]:
@@ -55,7 +55,7 @@ def __run_training(model_config:dict, training_config:dict, data_config:dict):
# 1. Load data, check for validity and process data (feature selection, dimensionality reduction, etc.) # 1. Load data, check for validity and process data (feature selection, dimensionality reduction, etc.)
X, y, target_returns = load_data(**configs['data_config']) X, y, target_returns = load_data(**configs['data_config'])
if check_data(X, y, training_config) is False: continue if check_data(X, y, configs['training_config']) is False: continue
X, original_X = process_data(X, y, configs) X, original_X = process_data(X, y, configs)
# 2. Train a Primary model with optional metalabeling for each asset # 2. Train a Primary model with optional metalabeling for each asset
+34 -43
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@@ -1,39 +1,51 @@
import pandas as pd import pandas as pd
from data_loader.load_data import load_data
from typing import Optional, Union from typing import Optional, Union
import warnings import warnings
from reporting.types import Reporting from data_loader.load_data import load_data
from data_loader.process_data import process_data, check_data
def run_inference_pipeline(data_config:dict, training_config:dict, all_models_all_assets:list[Reporting.Asset]): from reporting.types import Reporting
data_params = data_config.copy() from training.training_steps import primary_step, secondary_step
data_params['target_asset'] = data_params['assets'][0]
def run_inference_pipeline(data_config:dict, training_config:dict, model_config:dict, all_models_all_assets:list[Reporting.Asset]):
configs = dict(model_config=model_config, training_config=training_config, data_config=data_config)
configs['data_config']['target_asset'] = data_config['assets'][0]
X, y, _ = load_data(**data_params) primary_models, secondary_models = __select_models(configs, all_models_all_assets)
input_features = __select_data(X, training_config)
primary_step, secondary_step = __select_models(data_params, all_models_all_assets) result = __inference(configs, primary_models, secondary_models)
result = __inference(input_features, primary_step, secondary_step)
return result return result
def __inference(data:pd.DataFrame, primary_step:Union[Reporting.Training_Step,None], secondary_step:Union[Reporting.Training_Step,None]) -> pd.DataFrame: def __inference(configs:dict, primary_models:Union[Reporting.Training_Step,None], secondary_models:Union[Reporting.Training_Step, None]):
assert primary_step is not None, "No primary models found. Cancelling Inference." reporting = Reporting()
asset = configs['data_config']['target_asset']
data = __primary_models(data, primary_step)
# 1. Load data, truncate it, check for validity and process data (feature selection, dimensionality reduction, etc.)
X, y, target_returns = load_data(**configs['data_config'])
X, y = __select_data(X, y, configs['training_config'])
assert check_data(X, y, configs['training_config']) == False, "Data is not valid. Cancelling Inference."
X, original_X = process_data(X, y, configs)
# 2. Train a Primary model with optional metalabeling for each asset
training_step_primary, current_predictions = primary_step(X, y, original_X, asset, target_returns, configs, reporting, primary_models)
# 3. Train an Ensemble model with optional metalabeling for each asset
if secondary_step is not None: if secondary_step is not None:
warnings.warn("Secondary models are not specified.") warnings.warn("Secondary models are not specified.")
data = __secondary_models(data, secondary_step) training_step_secondary = secondary_step(X, y, original_X, current_predictions, asset, target_returns, configs, reporting, secondary_models)
return data # 4. Save the models
reporting.all_assets.append(Reporting.Asset(ticker=asset, primary=training_step_primary, secondary=training_step_secondary))
return reporting
def __select_models( data_params:dict, all_models_all_assets:list[Reporting.Asset])-> tuple[Union[Reporting.Training_Step,None], Union[Reporting.Training_Step, None]]: def __select_models( configs:dict, all_models_all_assets:list[Reporting.Asset])-> tuple[Union[Reporting.Training_Step,None], Union[Reporting.Training_Step, None]]:
target_asset_name = data_params['target_asset'][1] target_asset_name = configs['data_config']['target_asset'][1]
primary_step, secondary_step, = None, None primary_step, secondary_step, = None, None
target_asset_models = next((x for x in all_models_all_assets if x.name == target_asset_name), None) target_asset_models = next((x for x in all_models_all_assets if x.name == target_asset_name), None)
@@ -51,34 +63,13 @@ def __select_models( data_params:dict, all_models_all_assets:list[Reporting.Asse
return primary_step, secondary_step return primary_step, secondary_step
def __select_data(X:pd.DataFrame, training_config:dict)-> pd.DataFrame: def __select_data(X:pd.DataFrame, y:pd.Series, training_config:dict)-> tuple[pd.DataFrame, pd.Series]:
window_size = training_config['sliding_window_size_primary'] window_size = training_config['sliding_window_size_primary']
num_rows = X.shape[0] num_rows = X.shape[0]
if num_rows <= window_size: if num_rows <= window_size:
return X.copy() return X.copy(), y.copy()
else: else:
return X.truncate(before=int(num_rows-window_size), after=num_rows, copy=True) return X.truncate(before=int(num_rows-window_size), after=num_rows, copy=True), y.truncate(before=int(num_rows-window_size), after=num_rows, copy=True)
def __primary_models(data:pd.DataFrame, models:dict)-> pd.DataFrame:
for k, model in models:
last_model = model[-1]
prediction = last_model.predict(data.to_numpy())
# result = evaluate_predictions(
# model_name = model_name,
# target_returns = target_returns,
# y_pred = preds,
# y_true = y,
# method = method,
# no_of_classes=no_of_classes,
# print_results = print_results,
# discretize=True
# )
return data
def __secondary_models(data:pd.DataFrame, model:dict)-> pd.DataFrame:
return data
+5 -2
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@@ -6,6 +6,7 @@ import pandas as pd
from models.model_map import default_feature_selector_regression, default_feature_selector_classification from models.model_map import default_feature_selector_regression, default_feature_selector_classification
from models.base import Model from models.base import Model
from reporting.types import Reporting from reporting.types import Reporting
from typing import Union
def train_meta_labeling_model( def train_meta_labeling_model(
@@ -18,7 +19,8 @@ def train_meta_labeling_model(
data_config: dict, data_config: dict,
model_config: dict, model_config: dict,
training_config: dict, training_config: dict,
model_suffix: str model_suffix: str,
preloaded_models: Union[list[Reporting.Single_Model], None] = None
) -> tuple[pd.Series, pd.Series, pd.DataFrame, list[Reporting.Single_Model]]: ) -> tuple[pd.Series, pd.Series, pd.DataFrame, list[Reporting.Single_Model]]:
@@ -48,7 +50,8 @@ def train_meta_labeling_model(
scaler = training_config['scaler'], scaler = training_config['scaler'],
no_of_classes = 'two', no_of_classes = 'two',
level = 'meta_labeling', level = 'meta_labeling',
print_results = False print_results = False,
preloaded_models = preloaded_models
) )
if len(models) > 1: if len(models) > 1:
meta_preds = meta_preds.mean(axis = 1) meta_preds = meta_preds.mean(axis = 1)
+17 -14
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@@ -1,5 +1,5 @@
import pandas as pd import pandas as pd
from typing import Literal from typing import Literal, Union
from training.walk_forward import walk_forward_train, walk_forward_inference from training.walk_forward import walk_forward_train, walk_forward_inference
from utils.evaluate import evaluate_predictions from utils.evaluate import evaluate_predictions
from models.base import Model from models.base import Model
@@ -22,6 +22,7 @@ def train_primary_model(
no_of_classes: Literal['two', 'three-balanced', 'three-imbalanced'], no_of_classes: Literal['two', 'three-balanced', 'three-imbalanced'],
level: str, level: str,
print_results: bool, print_results: bool,
preloaded_models: Union[list[Reporting.Single_Model], None] = None
) -> tuple[pd.DataFrame, pd.DataFrame, pd.DataFrame, list[Reporting.Single_Model]]: ) -> tuple[pd.DataFrame, pd.DataFrame, pd.DataFrame, list[Reporting.Single_Model]]:
results = pd.DataFrame() results = pd.DataFrame()
@@ -29,23 +30,25 @@ def train_primary_model(
probabilities = pd.DataFrame(index=y.index) probabilities = pd.DataFrame(index=y.index)
all_models_single_asset: list[Reporting.Single_Model] = [] all_models_single_asset: list[Reporting.Single_Model] = []
if preloaded_models is not None:
models = preloaded_models
for model_name, model in models: for model_name, model in models:
model_over_time, transformations_over_time = walk_forward_train( if preloaded_models is None:
model_name=model_name, model_over_time, transformations_over_time = walk_forward_train(
model = model, model_name=model_name,
X = X if model.feature_selection == 'on' else original_X, model = model,
y = y, X = X if model.feature_selection == 'on' else original_X,
target_returns = target_returns, y = y,
expanding_window = expanding_window, target_returns = target_returns,
window_size = sliding_window_size, expanding_window = expanding_window,
retrain_every = retrain_every, window_size = sliding_window_size,
transformations= [get_scaler(scaler)], retrain_every = retrain_every,
) transformations= [get_scaler(scaler)],
)
preds, probs = walk_forward_inference( preds, probs = walk_forward_inference(
model_name = model_name, model_name = model_name,
model_over_time= model_over_time, model_over_time= model_over_time if preloaded_models is None else pd.Series(model),
transformations_over_time = transformations_over_time, transformations_over_time = transformations_over_time,
X = X if model.feature_selection == 'on' else original_X, X = X if model.feature_selection == 'on' else original_X,
expanding_window = expanding_window, expanding_window = expanding_window,
+7 -3
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@@ -5,6 +5,7 @@ from training.primary_model import train_primary_model
from training.meta_labeling import train_meta_labeling_model from training.meta_labeling import train_meta_labeling_model
from reporting.types import Reporting from reporting.types import Reporting
from typing import Union
def primary_step( def primary_step(
@@ -14,7 +15,8 @@ def primary_step(
asset:list, asset:list,
target_returns:pd.Series, target_returns:pd.Series,
configs: dict, configs: dict,
reporting: Reporting reporting: Reporting,
preloaded_training_step: Union[Reporting.Training_Step, None] = None
) -> tuple[Reporting.Training_Step, pd.DataFrame]: ) -> tuple[Reporting.Training_Step, pd.DataFrame]:
training_step = Reporting.Training_Step(level='primary') training_step = Reporting.Training_Step(level='primary')
model_config, training_config, data_config = itemgetter('model_config', 'training_config', 'data_config')(configs) model_config, training_config, data_config = itemgetter('model_config', 'training_config', 'data_config')(configs)
@@ -34,7 +36,8 @@ def primary_step(
scaler = training_config['scaler'], scaler = training_config['scaler'],
no_of_classes = data_config['no_of_classes'], no_of_classes = data_config['no_of_classes'],
level = 'primary', level = 'primary',
print_results= True print_results= True,
preloaded_models = preloaded_training_step.convert_step_to_tuple('base') if preloaded_training_step is not None else None
) )
training_step.base = all_models_for_single_asset training_step.base = all_models_for_single_asset
@@ -53,7 +56,8 @@ def primary_step(
data_config= data_config, data_config= data_config,
model_config= model_config, model_config= model_config,
training_config= training_config, training_config= training_config,
model_suffix = 'meta' model_suffix = 'meta',
preloaded_models =preloaded_training_step.convert_step_to_tuple('metalabeling') if preloaded_training_step is not None else None
) )
current_result[model_name] = primary_meta_result current_result[model_name] = primary_meta_result
current_predictions[model_name] = primary_meta_preds current_predictions[model_name] = primary_meta_preds