Files
NexQuant/rdagent/components/coder/data_science/pipeline/eval.py
T
amstrongzyf 80c953d405 fix: add metric in scores.csv and avoid reading sample_submission.csv (#1152)
* add scores.csv metric name in both task_gen and coder

* a little fix to column names

* small fix

* avoid sample submission read in task_gen

* avoid sample_submission reading in coding

* code change summary bug fix

* little update

* little refinement to eval

* refine coder and runner eval prompts

---------

Co-authored-by: Xu Yang <peteryang@vip.qq.com>
2025-08-04 19:53:08 +08:00

197 lines
9.9 KiB
Python

# tess successfully running.
# (GPT) if it aligns with the spec & rationality of the spec.
import json
import re
from pathlib import Path
import pandas as pd
from rdagent.app.data_science.conf import DS_RD_SETTING
from rdagent.components.coder.CoSTEER import CoSTEERMultiFeedback
from rdagent.components.coder.CoSTEER.evaluators import (
CoSTEEREvaluator,
CoSTEERSingleFeedback,
)
from rdagent.components.coder.CoSTEER.knowledge_management import (
CoSTEERQueriedKnowledgeV2,
)
from rdagent.components.coder.data_science.conf import get_clear_ws_cmd, get_ds_env
from rdagent.components.coder.data_science.utils import remove_eda_part
from rdagent.core.experiment import FBWorkspace, Task
from rdagent.scenarios.data_science.test_eval import get_test_eval
from rdagent.utils.agent.tpl import T
from rdagent.utils.agent.workflow import build_cls_from_json_with_retry
DIRNAME = Path(__file__).absolute().resolve().parent
PipelineSingleFeedback = CoSTEERSingleFeedback
PipelineMultiFeedback = CoSTEERMultiFeedback
class PipelineCoSTEEREvaluator(CoSTEEREvaluator):
def evaluate(
self,
target_task: Task,
implementation: FBWorkspace,
gt_implementation: FBWorkspace,
queried_knowledge: CoSTEERQueriedKnowledgeV2 = None,
**kwargs,
) -> PipelineSingleFeedback:
target_task_information = target_task.get_task_information()
if (
queried_knowledge is not None
and target_task_information in queried_knowledge.success_task_to_knowledge_dict
):
return queried_knowledge.success_task_to_knowledge_dict[target_task_information].feedback
elif queried_knowledge is not None and target_task_information in queried_knowledge.failed_task_info_set:
return PipelineSingleFeedback(
execution="This task has failed too many times, skip implementation.",
return_checking="This task has failed too many times, skip implementation.",
code="This task has failed too many times, skip implementation.",
final_decision=False,
)
env = get_ds_env(
extra_volumes={self.scen.debug_path: T("scenarios.data_science.share:scen.input_path").r()},
running_timeout_period=self.scen.real_debug_timeout(),
)
stdout = ""
implementation.execute(env=env, entry=get_clear_ws_cmd())
if DS_RD_SETTING.sample_data_by_LLM:
# Because coder runs on full data, we need to run debug mode in advance to save time
result = implementation.run(
env=env, entry=f"strace -e trace=file -f -o trace.log python -m coverage run main.py --debug"
)
else:
result = implementation.run(
env=env, entry=f"strace -e trace=file -f -o trace.log python -m coverage run main.py"
)
sample_submission_check = True
test_eval = get_test_eval()
if (sample_submission_file_name := test_eval.get_sample_submission_name(self.scen.competition)) is not None:
# check whether code ever opens the sample submission file
if (implementation.workspace_path / "trace.log").exists():
opened_trace_lines = [
line
for line in (implementation.workspace_path / "trace.log").read_text().splitlines()
if "openat" in line and sample_submission_file_name in line
]
if len(opened_trace_lines) > 0:
stdout += f"Code opened the sample submission file '{sample_submission_file_name}' during execution.\n Reject the implementation!\n"
sample_submission_check = False
result.stdout = remove_eda_part(result.stdout)
if result.exit_code != 0:
stdout += f"Code failed to run. Please check the stdout:\n Following the stdout of the debug mode run:\n{result.stdout.strip()}\n"
else:
stdout += f"Code ran successfully.\n Following the stdout of the debug mode run:\n{result.stdout.strip()}\n"
if DS_RD_SETTING.sample_data_by_LLM:
debug_time, full_estimated_time = None, None
if match := re.search(r"debug_time:\s*(\d+(?:.\d+)?)", result.stdout, re.DOTALL):
debug_time = float(match.group(1))
if match := re.search(r"estimated_time:\s*(\d+(?:.\d+)?)", result.stdout, re.DOTALL):
full_estimated_time = float(match.group(1))
if debug_time is not None and full_estimated_time is not None:
stdout += f"Debug mode ran in {debug_time:.2f} seconds, estimated full run time is {full_estimated_time:.2f} seconds. The estimated time is {full_estimated_time / env.conf.running_timeout_period * 100:.2f}% the debug time."
else:
stdout += "Debug mode did not provide debug_time or estimated_time, it's a buggy implementation.\n"
score_fp = implementation.workspace_path / "scores.csv"
score_ret_code = 0
score_check_text = ""
if not score_fp.exists():
score_check_text = "[Error] Metrics file (scores.csv) is not generated!"
score_ret_code = 1
else:
try:
score_df = pd.read_csv(score_fp, index_col=0)
model_set_in_scores = set(score_df.index)
# Check model names (index)
if not score_df.index.is_unique:
score_check_text += "\n[Error] The file 'scores.csv' contains duplicate model names."
score_ret_code = 1
if "ensemble" not in model_set_in_scores:
score_check_text += "\n[Error] The file 'scores.csv' doesn't contain the ensemble model."
score_ret_code = 1
if score_ret_code != 0:
score_check_text += f"The dataframe in file 'scores.csv' is:\n{score_df}"
# Check metric name (columns)
if score_df.columns.tolist() != [self.scen.metric_name]:
score_check_text += f"\n[Error] The scores dataframe does not contain the correct column names.\nCorrect columns is: ['{self.scen.metric_name}']\nBut got: {score_df.columns.tolist()}"
score_ret_code = 1
# Check if scores contain NaN (values)
if score_df.isnull().values.any():
nan_locations = score_df[score_df.isnull().any(axis=1)]
score_check_text += f"\n[Error] The scores dataframe contains NaN values at the following locations:\n{nan_locations}"
score_ret_code = 1
except Exception as e:
score_check_text += f"\n[Error] in checking the scores.csv file: {e}\nscores.csv's content:\n-----\n{score_fp.read_text()}\n-----"
score_ret_code = 1
test_eval = get_test_eval()
if DS_RD_SETTING.sample_data_by_LLM and test_eval.enabled(self.scen.competition):
submission_check_out, submission_ret_code = test_eval.valid(self.scen.competition, implementation)
stdout += f"\n### Submission check:\n{submission_check_out}\nIf Submission check returns a 'Submission is valid' or similar message, despite some warning messages, you should still consider the submission as valid and give a positive final decision. "
elif not test_eval.is_sub_enabled(self.scen.competition):
submission_ret_code = 0
else:
# Check submission file
base_check_code = T(".eval_tests.submission_format_test", ftype="txt").r()
implementation.inject_files(**{"test/submission_format_test.py": base_check_code})
# stdout += "----Submission Check 1-----\n"
submission_result = implementation.run(env=env, entry="python test/submission_format_test.py")
submission_check_out = submission_result.stdout
submission_ret_code = submission_result.exit_code
stdout += "\n" + submission_check_out
if not isinstance(implementation, FBWorkspace):
eda_output = None
else:
eda_output = implementation.file_dict.get("EDA.md", None)
queried_similar_successful_knowledge = (
queried_knowledge.task_to_similar_task_successful_knowledge[target_task.get_task_information()]
if queried_knowledge is not None
else []
)
system_prompt = T(".prompts:pipeline_eval.system").r(
is_sub_enabled=test_eval.is_sub_enabled(self.scen.competition),
debug_mode=DS_RD_SETTING.sample_data_by_LLM,
mle_check=DS_RD_SETTING.sample_data_by_LLM,
queried_similar_successful_knowledge=queried_similar_successful_knowledge,
)
user_prompt = T(".prompts:pipeline_eval.user").r(
scenario=self.scen.get_scenario_all_desc(eda_output=eda_output),
task_desc=target_task.get_task_information(),
stdout=stdout.strip(),
spec=T("scenarios.data_science.share:component_spec.Pipeline").r(metric_name=self.scen.metric_name),
code=implementation.file_dict["main.py"],
)
wfb = build_cls_from_json_with_retry(
PipelineSingleFeedback,
system_prompt=system_prompt,
user_prompt=user_prompt,
init_kwargs_update_func=PipelineSingleFeedback.val_and_update_init_dict,
)
if score_ret_code != 0 and wfb.final_decision is True:
wfb.final_decision = False
wfb.return_checking += "\n" + score_check_text
if submission_ret_code != 0 and wfb.final_decision is True:
wfb.final_decision = False
wfb.return_checking += "\nSubmission file check failed."
if sample_submission_check is False and wfb.final_decision is True:
wfb.final_decision = False
wfb.return_checking += (
"\nSample submission file check failed. Code should not open the sample submission file."
)
return wfb