Files
NexQuant/rdagent/app/data_science/loop.py
T
Xu Yang 6ec56a3f6c feat: add restart and fix unzip (#538)
* add restart function

* update

* fix ci

* update code

* fix restart

---------

Co-authored-by: yuanteli <1957922024@qq.com>
Co-authored-by: Xu Yang <xuyang1@microsoft.com>
2025-01-24 13:34:47 +08:00

177 lines
7.6 KiB
Python

from pathlib import Path
from typing import Any
import fire
from rdagent.app.data_science.conf import DS_RD_SETTING
from rdagent.components.coder.data_science.ensemble import EnsembleCoSTEER
from rdagent.components.coder.data_science.feature import FeatureCoSTEER
from rdagent.components.coder.data_science.model import ModelCoSTEER
from rdagent.components.coder.data_science.raw_data_loader import DataLoaderCoSTEER
from rdagent.components.coder.data_science.workflow import WorkflowCoSTEER
from rdagent.components.workflow.conf import BasePropSetting
from rdagent.components.workflow.rd_loop import RDLoop
from rdagent.core.exception import CoderError, RunnerError
from rdagent.core.proposal import ExperimentFeedback, HypothesisFeedback
from rdagent.core.scenario import Scenario
from rdagent.core.utils import import_class
from rdagent.log import rdagent_logger as logger
from rdagent.scenarios.data_science.dev.feedback import DSExperiment2Feedback
from rdagent.scenarios.data_science.dev.runner import DSRunner
from rdagent.scenarios.data_science.experiment.experiment import DSExperiment
from rdagent.scenarios.data_science.proposal.exp_gen import DSExpGen, DSTrace
from rdagent.scenarios.kaggle.kaggle_crawler import download_data
class DataScienceRDLoop(RDLoop):
skip_loop_error = (CoderError, RunnerError)
def __init__(self, PROP_SETTING: BasePropSetting):
logger.log_object(PROP_SETTING.competition, tag="competition")
scen: Scenario = import_class(PROP_SETTING.scen)(PROP_SETTING.competition)
### shared components in the workflow # TODO: check if
knowledge_base = (
import_class(PROP_SETTING.knowledge_base)(PROP_SETTING.knowledge_base_path, scen)
if PROP_SETTING.knowledge_base != ""
else None
)
# 1) task generation from scratch
# self.scratch_gen: tuple[HypothesisGen, Hypothesis2Experiment] = DummyHypothesisGen(scen),
# 2) task generation from a complete solution
# self.exp_gen: ExpGen = import_class(PROP_SETTING.exp_gen)(scen)
self.exp_gen = DSExpGen(scen)
self.data_loader_coder = DataLoaderCoSTEER(scen)
self.feature_coder = FeatureCoSTEER(scen)
self.model_coder = ModelCoSTEER(scen)
self.ensemble_coder = EnsembleCoSTEER(scen)
self.workflow_coder = WorkflowCoSTEER(scen)
self.runner = DSRunner(scen)
# self.summarizer: Experiment2Feedback = import_class(PROP_SETTING.summarizer)(scen)
# logger.log_object(self.summarizer, tag="summarizer")
# self.trace = KGTrace(scen=scen, knowledge_base=knowledge_base)
self.trace = DSTrace(scen=scen)
self.summarizer = DSExperiment2Feedback(scen)
super(RDLoop, self).__init__()
def direct_exp_gen(self, prev_out: dict[str, Any]):
exp = self.exp_gen.gen(self.trace)
logger.log_object(exp)
# FIXME: this is for LLM debug webapp, remove this when the debugging is done.
logger.log_object(exp, tag="debug_exp_gen")
return exp
def coding(self, prev_out: dict[str, Any]):
exp = prev_out["direct_exp_gen"]
for tasks in exp.pending_tasks_list:
exp.sub_tasks = tasks
if exp.hypothesis.component == "DataLoadSpec":
exp = self.data_loader_coder.develop(exp)
elif exp.hypothesis.component == "FeatureEng":
exp = self.feature_coder.develop(exp)
elif exp.hypothesis.component == "Model":
exp = self.model_coder.develop(exp)
elif exp.hypothesis.component == "Ensemble":
exp = self.ensemble_coder.develop(exp)
elif exp.hypothesis.component == "Workflow":
exp = self.workflow_coder.develop(exp)
else:
raise NotImplementedError(f"Unsupported component in DataScienceRDLoop: {exp.hypothesis.component}")
exp.sub_tasks = []
logger.log_object(exp)
return exp
def running(self, prev_out: dict[str, Any]):
exp: DSExperiment = prev_out["coding"]
if exp.next_component_required() is None:
new_exp = self.runner.develop(exp)
logger.log_object(new_exp)
return new_exp
else:
return exp
def feedback(self, prev_out: dict[str, Any]) -> ExperimentFeedback:
exp: DSExperiment = prev_out["running"]
if exp.next_component_required() is None:
feedback = self.summarizer.generate_feedback(exp, self.trace)
else:
feedback = ExperimentFeedback(
reason=f"{exp.hypothesis.component} is completed.",
decision=True,
)
logger.log_object(feedback)
return feedback
def record(self, prev_out: dict[str, Any]):
e = prev_out.get(self.EXCEPTION_KEY, None)
if e is None:
self.trace.hist.append((prev_out["running"], prev_out["feedback"]))
else:
self.trace.hist.append(
(
prev_out["direct_exp_gen"] if isinstance(e, CoderError) else prev_out["coding"],
ExperimentFeedback.from_exception(e),
)
)
if len(self.trace.hist) > DS_RD_SETTING.consecutive_errors:
cons_errors = 0
for _, feedback in reversed(self.trace.hist[-DS_RD_SETTING.consecutive_errors :]):
if feedback == ExperimentFeedback.from_exception(e) or feedback.reason.startswith(
"The experiment fails due to"
):
cons_errors += 1
else:
break
if cons_errors == DS_RD_SETTING.consecutive_errors + 1:
logger.error("Consecutive errors reached the limit. Dumping trace.")
logger.log_object(self.trace, tag="trace before restart")
self.trace = DSTrace(scen=self.trace.scen, knowledge_base=self.trace.knowledge_base)
logger.log_object(self.trace, tag="trace")
logger.log_object(self.trace.sota_experiment(), tag="SOTA experiment")
def main(path=None, step_n=None, competition="bms-molecular-translation"):
"""
Parameters
----------
path :
path like `$LOG_PATH/__session__/1/0_propose`. It indicates that we restore the state that after finish the step 0 in loop1
step_n :
How many steps to run; if None, it will run forever until error or KeyboardInterrupt
competition :
Auto R&D Evolving loop for models in a Kaggle scenario.
You can continue running session by
.. code-block:: bash
dotenv run -- python rdagent/app/data_science/loop.py [--competition titanic] $LOG_PATH/__session__/1/0_propose --step_n 1 # `step_n` is a optional parameter
rdagent kaggle --competition playground-series-s4e8 # You are encouraged to use this one.
"""
if competition is not None:
DS_RD_SETTING.competition = competition
if DS_RD_SETTING.competition:
if DS_RD_SETTING.scen.endswith("KaggleScen"):
download_data(competition=DS_RD_SETTING.competition, settings=DS_RD_SETTING)
else:
if not Path(f"{DS_RD_SETTING.local_data_path}/{competition}").exists():
logger.error(f"Please prepare data for competition {competition} first.")
return
else:
logger.error("Please specify competition name.")
if path is None:
kaggle_loop = DataScienceRDLoop(DS_RD_SETTING)
else:
kaggle_loop = DataScienceRDLoop.load(path)
kaggle_loop.run(step_n=step_n)
if __name__ == "__main__":
fire.Fire(main)