Commit Graph

139 Commits

Author SHA1 Message Date
Yuante Li c321ebfbcb fix: fix some bugs in the ensemble component (#595)
* allow the LLM in the ensemble to focus on the significance of metrics

* fix a bug in feedback

* prun spec

* fix a bug in ensemble

* delete unnecessary prompts

* fix the logic in spec

* generalize dataset split
2025-02-14 15:32:40 +08:00
Xu Yang 1a44a954df feat: integrate azure deepseek r1 (#591)
* fix several task & integrate deepseek R1

* fix CI

---------

Co-authored-by: Xu Yang <xuyang1@microsoft.com>
2025-02-13 22:20:17 +08:00
炼金术师华华 97c1f7a021 feat(backend): integrate LiteLLM API Backend (#564)
* File structure for supporting litellm

* more litellm support

* feat: Add CachedAPIBackend class and dynamic API backend retrieval function

* fix: update benchmark folder path and add default values for architecture and hyperparameters

* feat: add LiteLLMAPIBackend and DeprecBackend ; changed structure of the project ; with bus

* fix : deprec_backend

* feat: Add LiteLLMAPIBackend class and related features; update configuration and test cases.

* feat: Enhance LiteLLMAPIBackend with encoder support and dynamic argument handling;Enhance log Colors

* lint

* fix lint...

* fix: Lint

* fix:make auto-lint

* fix:test oai

* fix:redundant _abckend.py

* fix: Optimize LiteLLMAPIBackend on token counting functiona, and clean up unused code;add test on this function

* feat: Add LiteLLMSettings class and update model settings usage

* fix: Update LiteLLMSettings environment variable prefix and model configurations

* fix : gitignore

* test: Consolidate and relocate test files for litellm backend and oai

* fix : lint

* fix: lint

* auto lint

* lint

* LINT

* lint

* chore: remove deprecated backend configuration comments

* refactor: Remove unused functions and imports from deprec.py and llm_utils.py

* refactor: Move md5_hash function from deprec.py to llm_utils.py

* chore: Remove extra newline and add missing import in deprec.py

* lint

* refactor: Move md5_hash function to utils module

* lint

* lint

* lint

---------

Co-authored-by: Young <afe.young@gmail.com>
Co-authored-by: Yihua Chen <v-yihuachen@microsoft.com>
2025-02-13 15:16:18 +08:00
Tim da7169675c ignore score value (#586) 2025-02-12 11:39:49 +08:00
XianBW 6de33fa13b fix: coder prompt & model test text (#583)
* test text fix

* Require LLM to use print() instead of logging
2025-02-11 21:12:25 +08:00
Xu Yang c1085921b5 add feedback to workspace and ds runner base on costeer 2025-02-11 20:50:19 +08:00
Tim 13214ba5d0 avoid length exception (#580) 2025-02-11 18:12:45 +08:00
Yuante Li 345a702501 fix: fix the errors in the coder and evaluator of the five components (#576)
* refine the prompt in feat coder

* refine data loader prompt in coder & eval

* fix

* fix

* refine model prompt in coder & eval

* refine ensemble prompt in coder & eval

* refine workflow prompt in coder & eval

* fix
2025-02-10 20:20:30 +08:00
Yuante Li d2baa40fb1 add the none check for data loader & feature output (#577) 2025-02-10 20:18:01 +08:00
XianBW f37ec32981 text change (#568) 2025-02-08 21:14:13 +08:00
XianBW 7eb7f49f52 fix: add scores.csv checking in ensemble_test (#567)
* add scores.csv checking in ensemble_test

* text modify
2025-02-08 19:03:29 +08:00
Tim 94d0eca0ca support multiple types in feature engineering (#562) 2025-02-08 15:21:11 +08:00
Xu Yang b2d56e39e5 fix: move mlebench check into runner (#556)
* abandon mlebench check in workflow

* move mlebench check to runner and put it into the exp
2025-02-06 15:37:41 +08:00
you-n-g 1678461f5a fix: handle division by zero in percentage calculations (#550)
* fix: Handle division by zero in percentage calculations

* lint
2025-02-05 10:21:53 +08:00
you-n-g 35e3156018 fix: replace API call with build_cls_from_json_with_retry function (#548)
* refactor: Replace API call with build_cls_from_json_with_retry function

* fix lint error

* fix lint errors

* lint

* trigger
2025-01-27 20:19:11 +08:00
Xu Yang 611fb28c58 fix: refine prompt to generate the most simple task in init stage (#546)
* refine prompt to generate the most simple task in init stage

* feature test dtype check improve
2025-01-27 00:51:40 +08:00
XianBW 10abb20117 feat: add mlebench submission validitor (#545)
* add mlebench submission check

* fix CI

* fix bug
2025-01-27 00:41:35 +08:00
you-n-g 6e96cff435 fix: fix submission file search and add TODO in env.py (#544) 2025-01-26 17:08:59 +08:00
you-n-g 4235440ff4 feat: Dynamically find and use sample submission file in eval tests (#542) 2025-01-24 18:16:15 +08:00
Tim 111dddda18 chore: rename ens_and_decision (#541)
* rename ens_and_decision

* clarify workflow prompt

* rename
2025-01-24 17:24:31 +08:00
Xu Yang e5b1912bfd fix inject code bug and improve dataloader spec code (#532) 2025-01-23 13:24:44 +08:00
Xu Yang f19a91abfc fix minor bug in feature test (#531) 2025-01-23 10:15:21 +08:00
Xu Yang 7ff55f0013 update all (#530) 2025-01-22 22:22:48 +08:00
you-n-g 17a901e8da feat: Enhance eval script with file cleanup and detailed submission checks (#529) 2025-01-22 21:51:34 +08:00
Tim a355b57623 chore: add runtime info (#526)
* add runtime info

* Update rdagent/scenarios/data_science/scen/__init__.py

Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>

* reformatted by black

---------

Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
2025-01-21 16:15:45 +08:00
you-n-g 7f4c2d18c6 feat: refactor for general data science (#498)
* refine ds modal for more cases: eval and es

* update model template

* prompts for model and ensemble

* fix a bug

* fix a bug

* init: ds workflow evovingstrategy

* Adding ensemble (#505)

* Initial Draft

* Updating logic for init

* Revising

* Successful Testing

* Updating to use the latest & right class

* bug: bug-fixing for testing

* data science loop changes

* data science loop base

* ds loop feedback

* fix

* remove measure_time because it's duplicated (in LoopBase)

* add the knowledge query for data_loader & feature

* edit ds workflow evaluator

* data_loader bug fix

* stop evolving when all tasks completed

* llm app change

* fix break all complete strategy

* Adding queried knowledge (#508)

Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>

* fix loop bug

* ds workflow evaluator; test; refine prompts

* workflow spec

* fix ci

* feature task changes

* ds loop change

* fix a bug in feat

* add query knowledge for model and workflow

* llm_debug info(for show) using pickle instead of json

* remove NextLoopException

* loop change

* coder raise CoderError when all sub_tasks failed

* rename code_dict to file_dict in FBWorkspace

* add CoSTEER unittest

* now show self.version in Task.get_task_information(), simplify CoSTEER sub tasks definition

* remove some properties in ModelTask, add model_type in it.

* fix llm app bug

* llm web app bug fix

* ds loop bug fix

* fix: give component code to feature&ens eval

* loop catch error bug

* rename load_from_raw_data to load_data

* feat: Add debug data creation functionality for data science scenarios

* support local folder (#511)

* support local folder

* remove unnecessary random

* KaggleScen Subclass

* small fix

* use template for style description

* update default scen to kaggle

* update sample data script

* make sure frac < 1

* fix a bug

* feature spec changes

* fix

* changeimport order

* clear unnecessary std outputs

* fix a typo

* create sample folder after unzip kaggle data

* feature/model test script update

* Align the data types across modules.

* fix a bug in model eval

* show line number

* move sample entry point to app

* spec & model prompt changes

* Refine the competition specification to address the data type problem and the coherence issue.

* fix some bugs

* add file filter in FBworkspace.code property

* support non-binary prediction

* avoid too much warnings

* fix a bug in ensemble module

* filtered the knowledge query in all modules

* delete RAG in idea proposal

* refine the code in ensemble

* show exp workspace in llm_st

* exp_gen bug fix

* feedback bug fix

* use `feature` instead of `feat01`

* Trace & method of judging if exp is completed change

* fix a bug in package calling and execute ci

* fix code

* bug fix

* bug fix

* fix a bug

* fix some bugs

* fix a bug

* refactor: Enhance error handling and feedback in data science loop

* support different use_azure on chat and embedding models

* multi-model proposal logic

* fix a small syntax error

* loopBase and some changes

* ensemble scores change

* fbworkspace.code -> .all_codes

* use all model codes in workflow coder

* check scores.csv's keys(model_names)

* model name changes

* add a todo in  ensemble test

* sota_exp changes

* give model info in exp gen

* add runner time limit

* config using debug data or not in evals

* exp to feedback base

* add feature code when writing model task

* small problem

* copying during sampling

* update

* refactor: Simplify code handling and improve workspace management

* model part output fix

* print model's execution time

* bug fix

* ensemble test fix

* ens small change

* ens_test bug fix

* Refine partial expansion logic to display only a few subfolders when their structure is uniform, improving readability in nested directories.

* several update on prompts

* sample subfolders

* Filter the stdout after code execution to remove irrelevant information e.g. progress bars, whitespace characters, excessive line breaks.

* Add some more prompts and comments

* several update on the first init rounds

* model timeout as error

* fix pattern of getting model codes in workspace

* small bux fix on model prompts

* remove get_code_with_key since we have regex pattern

* fix: Correct tqdm progress bar update logic in LoopBase class

* feat: Add diff generation and enhance feedback mechanism in data science loop

* update some fix to model and workflow prompts

* refine the logic of progress bar filter

* add last_successful_exp in exp_gen

* fix a one line bug

* add a hint in prompt

* fix data sample for bms

* fix data sample for bms

* hypothesis small fix

* crawler readme update

* fix component gen

* fix bug

* annotation change

* load description.md if it exists

* refactor: Simplify SOTA description handling in feedback and prompts

* refactor: Use shared templates for feedback and experiment descriptions

* change webapp for model codes changes

* update proposal

* add timeout message for docker run output

* fix

* refine the code in docker time processing

* use .shape instead of len() when do shape eval

* won't change size during iteration

* support bson sample

* sample support jsonl and bson

* add former_code to coder prompts

* a little speed us in debug data creating

* filter progress bar when eval ens and main

* avoid costeer makes no change to former code

* fix several log error

* add timeout judge threshold

* fix some bugs in the evaluation of component output shapes

* File structure for supporting litellm (#517)

Co-authored-by: Young <afe.young@gmail.com>

* ignore submission and show processing

* ignore submission and show processing

* add efficiency notice

* refactor: Enhance error message with detailed feedback summary

* refactor: Simplify component handling in DSExpGen class

* refactor: Update code structure and add docstring for clarity

* reserve one sample to each label in data sampling

* add Evaluation info

* refine costeer code to avoid giving same code twice

* use raw_description as plain text

* add a prompt hint to avoid same dict key

* model task name bug in first model exp gen

* fix a typo

* add some debug info in costeer tests

* task init change

* enhance data sampling

* refine the code in data_loader

* more reasonable loop

* fix a bug in data folder description

* add error msg & traceback to execution feedback

* fix llm error msg detection

* add task information to costeer eval & add cache to docker run(use zipfile to store the whole workspace)

* fix CI first round

* fix CI second round

* use txt to store test script to avoid pytest

* remove zipfile in requirements

* add azure.identity to requirements

* ignore debug web page

* component test changes

* remove redundent task_desc in model coder

* feat: Add APE module and prompts for automated prompt engineering

* fix: Update .gitignore and improve text formatting in eval.py

* refactor: Update print output and improve code comments and imports

* style: Fix string formatting and import order in ape.py and fmt.py

* exclude ape

* add a data folder notice

* reduce unnecessary output to stdout

* refine the code of describe_data_folder

* fix ci

* style: streamlit style update (#522)

* streamlit style update

* fix import

* fix format

* fix llm_st loop progress bar

* debugapp small change

* fix model str

* refine some prompts

* fix model str

* fix CI

* refine the logic associated with the data_folder

* fix ci

* small change

* set filter_progress_bar as default in execute

* model proposal with workflow

* add submission check in workflow eval

* fix bug

* small change

* fix CI

* fix CI

* refactor: Move generate_diff to utils and update DSExpGen logic

* more reasonable prompt describing metric direction

* fix a minor jinja2 bug

* quick fix exp_gen bugs

* fix the following bug

* fix

* fix some bugs

* remove workflow from model

* add pending_tasks_list in data science to enable coding model and workflow

* refine the code for handling JSON-formatted data descriptions

* assert with information

* ensure correct csv file name

* add logging to help record the output

* log competition

* add log tag for debug llm app

* test: Test ds refactor ll (#523)

* fix bugs to former scenario

* fix a bug because coding in rdloop changed

* fix the bug when feedback gets no hypothesis

* fix trace structure

* change all trace hist when merging hypothesis to experiments

* ignore some error in ruff

* fix kaggle scenario bugs

* refine one line

* another bug

* another small bug

* fix ui bugs

* chage kaggle  train.py path

---------

Co-authored-by: Xu Yang <peteryang@vip.qq.com>

* fix CI

* Update rdagent/app/data_science/loop.py

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* add samplecsv into spec prompts

* fix CI

---------

Co-authored-by: TPLin22 <tplin2@163.com>
Co-authored-by: yuanteli <1957922024@qq.com>
Co-authored-by: Xisen Wang <118058822+xisen-w@users.noreply.github.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: Xu Yang <peteryang@vip.qq.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
Co-authored-by: Tim <illking@foxmail.com>
Co-authored-by: 炼金术师华华 <37462254+YeewahChan@users.noreply.github.com>
Co-authored-by: Linlang <30293408+SunsetWolf@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2025-01-17 22:53:05 +08:00
Haoran Pan cff2d79c42 fix bug in model evaluator final feedback ignoring shape feedback (#501) 2024-12-03 13:55:28 +08:00
you-n-g c3f78f8bce feat: run benchmark on gpt-4o & llama 3.1 (#497)
* Run benchmark on gpt-4o & llama 3.1

* update link
2024-11-26 12:02:09 +08:00
Xu Yang b7fcb13c33 feat: a unified CoSTEER to fit more scenarios (#491)
* Use ExtendedBaseSettings to replace BaseSettings

* update a more general way to pass the default setting

* update all code

* fix CI

* fix CI

* fix qlib scenario

* fix CI

* fix CI

* fix CI & add data science interfaces

* remove redundant code

* abandon costeer knowledge base v1

---------

Co-authored-by: Xu Yang <xuyang1@microsoft.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
2024-11-25 16:27:34 +08:00
you-n-g ae8fc773cb feat: new-york-city-taxi-fare-prediction_template (#488)
* copy init version

* feat: new-york-city-taxi-fare-prediction_template

* add move to linear model

* Add more details about docker

* auto lint

* auto lint with new black
2024-11-15 16:47:44 +08:00
Xu Yang 8662211492 feat: align mlebench data and evaluation & several fix on kaggle workflow (#477)
* several improvement on kaggle loop

* small refinement on prompt

* fix bugs

* add the score of each model in every experiment

* fix ci error

* fix error in ventilator tpl

* fix CI

---------

Co-authored-by: Xu Yang <xuyang1@microsoft.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: WinstonLiye <1957922024@qq.com>
Co-authored-by: TPLin22 <tplin2@163.com>
2024-11-15 15:40:22 +08:00
Xu Yang 90d9cdd0e9 feat(kaggle): several update in kaggle scenarios (#476)
* udpate plot

* log and reduce token

* trace tag

* add simple_background parameter to get_scenario_all_desc

* update trace

* update first version code

* chat model map

* add annotation for stack index

* add annotation

* reformatted by black

* several update on kaggle scenarios

* update some new change

* fix CI

* fix CI

* fix a bug

* fix bugs in graph RAG

---------

Co-authored-by: Tim <illking@foxmail.com>
2024-11-06 13:14:35 +08:00
WinstonLiyt 450317d8fe fix a bug in kaggle runner cache and kaggle costeer execute template (#467) 2024-11-04 11:16:16 +08:00
Linlang 6fe0d75b38 chore: remove package (#449)
* remove package

* reformat with black

* fix pytest error

* fix pytest error

* fix pytest error

* add packages

* change code
2024-10-24 20:38:13 +08:00
Tim effce1df15 always return str (#453) 2024-10-23 16:47:36 +08:00
Linlang d3c59b2f33 chore: remove torch in main code (#439)
* use np.ndarray in costeer model evaluators

* remove package

* fix test error

---------

Co-authored-by: Xu Yang <peteryang@vip.qq.com>
2024-10-21 15:56:04 +08:00
Xu Yang b2de6f3190 add inf evaluator to factor costeer and some minor improvement (#435) 2024-10-16 16:00:55 +08:00
Tim 022a558dd1 chore: more optional parameters for running benchmark analysis (#431)
* set title and round

* decision from multiple types

* check if decision is true

* reformat

* remove unused file
2024-10-15 12:41:32 +08:00
Xu Yang 5988683cd9 force use_chat_cache False when facing error in evaluators (#432) 2024-10-15 12:21:33 +08:00
Tim 216719670d convert str to bool (#428) 2024-10-14 17:44:33 +08:00
Xu Yang 25472fc1e3 feat: use unified pickle cacher & move llm config into a isolated config (#424)
* simplify RDAgent conf

* add unified cacher(untested)

* fix small bugs

* fix a bug

* fix a small bug in runner

* use hash_key = None to skip cache

* fix CI

* in factor execution, ignore cache when raise exception

* add file locker to avoid mp calling

* fix CI

* use function __module__ name as folder in cache
2024-10-14 17:34:09 +08:00
Xu Yang f1a841ba14 perf: some small upgrade to factor costeer to improve the performance (#420)
* 1. use dataframe.info instead of head
2. in former trace query, add the latest attempt to the last success execution

* fix CI
2024-10-10 20:29:17 +08:00
Xu Yang f2a5967c12 improve factor costeer: (#417)
1. when facing odd v2_query_component_limit, make from gt bigger than without gt
2. do code evaluator even value does not pass
3. provide the value header to value failed evaluators
2024-10-09 18:56:37 +08:00
WinstonLiyt 59cdf946a7 fix: fix some bugs in rag (#399)
* fix some bugs in rag

* fix a bug in costeer
2024-09-30 02:38:33 +08:00
you-n-g 7fc53940fd feat: Dynamic scenario based on task (#392)
* OAI api

* more comments

* llm utils

* RD-Framework for dynamic scen

* remove useless code

* auto lint

* fix dynamic scennario

* Add parameter

* auto lint

* remove abstractmethod

* fix lint
2024-09-29 18:43:17 +08:00
cyncyw 5cdffe3510 fix: debug dsagent (#387)
* basic dsagent & debug

debug dsagent

change dsagent conf

* Refine changes

* Update vector_base.py
2024-09-29 01:15:33 -04:00
you-n-g 7b865c3337 fix: cache (#383)
* fix: cache

* update cache

* fix

* Fix lint
2024-09-29 12:07:36 +08:00
you-n-g 346261c1ac fix: partial bug in bench (#368)
* Add more log

* Fix eval

* update

* keep ratio <= 1

* feat: cache exception (#369)

* 0 instead of NaN

* remove unused evaluators

* save gen_factor_l_all_rounds

* black reformat

* cache exception

---------

Co-authored-by: Tim <illking@foxmail.com>
2024-09-29 09:59:54 +08:00
WinstonLiyt a885f9cfdc fix a bug in code costeer (#373) 2024-09-28 03:55:41 +08:00
Xu Yang f7c1c4fd74 feat: implement isolated model feature selection loop (#370)
* rename meta_tpl

* use a isolated coder to deal with model feature selection and refine the structure

* fix CI

* fix: fix some errors in scenario.py, proposal.py and runner.py and several complex competition scenarios(#365)

* fix several bugs in proposal and runner

* fix a bug in feedback-prize-english-language-learning

* fix some bugs and templates

* fix the bug in optiver and nlp problem

* delete unnecessary codes

* remove unnecessary codes

* complete forest and s4e8

* push

* feedback & s4e8 &  forest

* optiver finished

* s3e11 & s3e26

* s4e9 finished

* sf-crime finished

* the last one finished

---------

Co-authored-by: WinstonLiyt <104308117+WinstonLiyt@users.noreply.github.com>
Co-authored-by: WinstonLiyte <1957922024@qq.com>
2024-09-28 00:40:25 +08:00