Commit Graph

24 Commits

Author SHA1 Message Date
Xu Yang a57e625b17 feat: add eda to data science scenario (#639)
* add eda to data science scenario

* fix CI
2025-02-26 22:35:44 +08:00
Xu Yang d7da15c826 feat: add max time config to costeer in data science (#645)
* add max time config to costeer

* fix a small bug

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Co-authored-by: Xu Yang <xuyang1@microsoft.com>
2025-02-26 18:36:51 +08:00
Yuante Li ac7c2155e4 fix: clarify cross_validation (#644) 2025-02-26 17:52:30 +08:00
XianBW 28f072da31 change ensemble metric prompt's code tips (#640) 2025-02-26 11:40:25 +08:00
XianBW 34e143cd66 fix: avoid try-except in ensemble eval prompts (#637)
* avoid try-except in prompts

* remove try-except limit from coder prompt

* add no try-except criteria in ensemble eval
2025-02-25 23:06:41 +08:00
XianBW 54cd73eb85 fix: add ensemble test, change to "use cross-validation if possible" in workflow spec (#634)
* change to "use cross-validation if possible" in workflow spec

* Limit the evaluation indicator to only one

* add metric tips

* string change
2025-02-24 20:28:32 +08:00
Yuante Li b64ab18caa fix: fix a bug in cross validation (#618)
* fix a bug in cross_validation

* fix cross-validation prompt position

* fix

* fix

* append all error messages and full traceback details in execution

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Co-authored-by: Bowen Xian <xianbowen@outlook.com>
2025-02-20 16:18:40 +08:00
Xu Yang 75e496d461 fix restart bug (#609) 2025-02-18 15:39:34 +08:00
Yuante Li 21d88f38d0 fix: fix some minor bugs and add AutoML & cross-validation (#604)
* fix some complex sentences

* add AutoML in model and cross-validation in workflow
2025-02-17 19:14:50 +08:00
you-n-g ffc85936f1 refactor: refactor core framework to better propogate feedbacks (#599)
* refactor: Update type annotations and remove unused class in evolving modules

* refactor: Simplify evolving agent and feedback handling in CoSTEER module

* lint & CI

* mypy

* ruff for core

* mypy

* refactor: remove unnecessary comments and update feedback handling logic

* refactor: Add prev_task_feedback parameter to evolving strategies

* feat: Clear folder before extracting zip file in DockerEnv

* fix: Correct retrieval of last experiment from history
2025-02-16 01:40:44 +08:00
Yuante Li c321ebfbcb fix: fix some bugs in the ensemble component (#595)
* allow the LLM in the ensemble to focus on the significance of metrics

* fix a bug in feedback

* prun spec

* fix a bug in ensemble

* delete unnecessary prompts

* fix the logic in spec

* generalize dataset split
2025-02-14 15:32:40 +08:00
Xu Yang 1a44a954df feat: integrate azure deepseek r1 (#591)
* fix several task & integrate deepseek R1

* fix CI

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Co-authored-by: Xu Yang <xuyang1@microsoft.com>
2025-02-13 22:20:17 +08:00
XianBW 6de33fa13b fix: coder prompt & model test text (#583)
* test text fix

* Require LLM to use print() instead of logging
2025-02-11 21:12:25 +08:00
Xu Yang c1085921b5 add feedback to workspace and ds runner base on costeer 2025-02-11 20:50:19 +08:00
Yuante Li 345a702501 fix: fix the errors in the coder and evaluator of the five components (#576)
* refine the prompt in feat coder

* refine data loader prompt in coder & eval

* fix

* fix

* refine model prompt in coder & eval

* refine ensemble prompt in coder & eval

* refine workflow prompt in coder & eval

* fix
2025-02-10 20:20:30 +08:00
Yuante Li d2baa40fb1 add the none check for data loader & feature output (#577) 2025-02-10 20:18:01 +08:00
you-n-g 1678461f5a fix: handle division by zero in percentage calculations (#550)
* fix: Handle division by zero in percentage calculations

* lint
2025-02-05 10:21:53 +08:00
you-n-g 35e3156018 fix: replace API call with build_cls_from_json_with_retry function (#548)
* refactor: Replace API call with build_cls_from_json_with_retry function

* fix lint error

* fix lint errors

* lint

* trigger
2025-01-27 20:19:11 +08:00
Tim 111dddda18 chore: rename ens_and_decision (#541)
* rename ens_and_decision

* clarify workflow prompt

* rename
2025-01-24 17:24:31 +08:00
Xu Yang e5b1912bfd fix inject code bug and improve dataloader spec code (#532) 2025-01-23 13:24:44 +08:00
Xu Yang 7ff55f0013 update all (#530) 2025-01-22 22:22:48 +08:00
Tim a355b57623 chore: add runtime info (#526)
* add runtime info

* Update rdagent/scenarios/data_science/scen/__init__.py

Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>

* reformatted by black

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Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
2025-01-21 16:15:45 +08:00
you-n-g 7f4c2d18c6 feat: refactor for general data science (#498)
* refine ds modal for more cases: eval and es

* update model template

* prompts for model and ensemble

* fix a bug

* fix a bug

* init: ds workflow evovingstrategy

* Adding ensemble (#505)

* Initial Draft

* Updating logic for init

* Revising

* Successful Testing

* Updating to use the latest & right class

* bug: bug-fixing for testing

* data science loop changes

* data science loop base

* ds loop feedback

* fix

* remove measure_time because it's duplicated (in LoopBase)

* add the knowledge query for data_loader & feature

* edit ds workflow evaluator

* data_loader bug fix

* stop evolving when all tasks completed

* llm app change

* fix break all complete strategy

* Adding queried knowledge (#508)

Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>

* fix loop bug

* ds workflow evaluator; test; refine prompts

* workflow spec

* fix ci

* feature task changes

* ds loop change

* fix a bug in feat

* add query knowledge for model and workflow

* llm_debug info(for show) using pickle instead of json

* remove NextLoopException

* loop change

* coder raise CoderError when all sub_tasks failed

* rename code_dict to file_dict in FBWorkspace

* add CoSTEER unittest

* now show self.version in Task.get_task_information(), simplify CoSTEER sub tasks definition

* remove some properties in ModelTask, add model_type in it.

* fix llm app bug

* llm web app bug fix

* ds loop bug fix

* fix: give component code to feature&ens eval

* loop catch error bug

* rename load_from_raw_data to load_data

* feat: Add debug data creation functionality for data science scenarios

* support local folder (#511)

* support local folder

* remove unnecessary random

* KaggleScen Subclass

* small fix

* use template for style description

* update default scen to kaggle

* update sample data script

* make sure frac < 1

* fix a bug

* feature spec changes

* fix

* changeimport order

* clear unnecessary std outputs

* fix a typo

* create sample folder after unzip kaggle data

* feature/model test script update

* Align the data types across modules.

* fix a bug in model eval

* show line number

* move sample entry point to app

* spec & model prompt changes

* Refine the competition specification to address the data type problem and the coherence issue.

* fix some bugs

* add file filter in FBworkspace.code property

* support non-binary prediction

* avoid too much warnings

* fix a bug in ensemble module

* filtered the knowledge query in all modules

* delete RAG in idea proposal

* refine the code in ensemble

* show exp workspace in llm_st

* exp_gen bug fix

* feedback bug fix

* use `feature` instead of `feat01`

* Trace & method of judging if exp is completed change

* fix a bug in package calling and execute ci

* fix code

* bug fix

* bug fix

* fix a bug

* fix some bugs

* fix a bug

* refactor: Enhance error handling and feedback in data science loop

* support different use_azure on chat and embedding models

* multi-model proposal logic

* fix a small syntax error

* loopBase and some changes

* ensemble scores change

* fbworkspace.code -> .all_codes

* use all model codes in workflow coder

* check scores.csv's keys(model_names)

* model name changes

* add a todo in  ensemble test

* sota_exp changes

* give model info in exp gen

* add runner time limit

* config using debug data or not in evals

* exp to feedback base

* add feature code when writing model task

* small problem

* copying during sampling

* update

* refactor: Simplify code handling and improve workspace management

* model part output fix

* print model's execution time

* bug fix

* ensemble test fix

* ens small change

* ens_test bug fix

* Refine partial expansion logic to display only a few subfolders when their structure is uniform, improving readability in nested directories.

* several update on prompts

* sample subfolders

* Filter the stdout after code execution to remove irrelevant information e.g. progress bars, whitespace characters, excessive line breaks.

* Add some more prompts and comments

* several update on the first init rounds

* model timeout as error

* fix pattern of getting model codes in workspace

* small bux fix on model prompts

* remove get_code_with_key since we have regex pattern

* fix: Correct tqdm progress bar update logic in LoopBase class

* feat: Add diff generation and enhance feedback mechanism in data science loop

* update some fix to model and workflow prompts

* refine the logic of progress bar filter

* add last_successful_exp in exp_gen

* fix a one line bug

* add a hint in prompt

* fix data sample for bms

* fix data sample for bms

* hypothesis small fix

* crawler readme update

* fix component gen

* fix bug

* annotation change

* load description.md if it exists

* refactor: Simplify SOTA description handling in feedback and prompts

* refactor: Use shared templates for feedback and experiment descriptions

* change webapp for model codes changes

* update proposal

* add timeout message for docker run output

* fix

* refine the code in docker time processing

* use .shape instead of len() when do shape eval

* won't change size during iteration

* support bson sample

* sample support jsonl and bson

* add former_code to coder prompts

* a little speed us in debug data creating

* filter progress bar when eval ens and main

* avoid costeer makes no change to former code

* fix several log error

* add timeout judge threshold

* fix some bugs in the evaluation of component output shapes

* File structure for supporting litellm (#517)

Co-authored-by: Young <afe.young@gmail.com>

* ignore submission and show processing

* ignore submission and show processing

* add efficiency notice

* refactor: Enhance error message with detailed feedback summary

* refactor: Simplify component handling in DSExpGen class

* refactor: Update code structure and add docstring for clarity

* reserve one sample to each label in data sampling

* add Evaluation info

* refine costeer code to avoid giving same code twice

* use raw_description as plain text

* add a prompt hint to avoid same dict key

* model task name bug in first model exp gen

* fix a typo

* add some debug info in costeer tests

* task init change

* enhance data sampling

* refine the code in data_loader

* more reasonable loop

* fix a bug in data folder description

* add error msg & traceback to execution feedback

* fix llm error msg detection

* add task information to costeer eval & add cache to docker run(use zipfile to store the whole workspace)

* fix CI first round

* fix CI second round

* use txt to store test script to avoid pytest

* remove zipfile in requirements

* add azure.identity to requirements

* ignore debug web page

* component test changes

* remove redundent task_desc in model coder

* feat: Add APE module and prompts for automated prompt engineering

* fix: Update .gitignore and improve text formatting in eval.py

* refactor: Update print output and improve code comments and imports

* style: Fix string formatting and import order in ape.py and fmt.py

* exclude ape

* add a data folder notice

* reduce unnecessary output to stdout

* refine the code of describe_data_folder

* fix ci

* style: streamlit style update (#522)

* streamlit style update

* fix import

* fix format

* fix llm_st loop progress bar

* debugapp small change

* fix model str

* refine some prompts

* fix model str

* fix CI

* refine the logic associated with the data_folder

* fix ci

* small change

* set filter_progress_bar as default in execute

* model proposal with workflow

* add submission check in workflow eval

* fix bug

* small change

* fix CI

* fix CI

* refactor: Move generate_diff to utils and update DSExpGen logic

* more reasonable prompt describing metric direction

* fix a minor jinja2 bug

* quick fix exp_gen bugs

* fix the following bug

* fix

* fix some bugs

* remove workflow from model

* add pending_tasks_list in data science to enable coding model and workflow

* refine the code for handling JSON-formatted data descriptions

* assert with information

* ensure correct csv file name

* add logging to help record the output

* log competition

* add log tag for debug llm app

* test: Test ds refactor ll (#523)

* fix bugs to former scenario

* fix a bug because coding in rdloop changed

* fix the bug when feedback gets no hypothesis

* fix trace structure

* change all trace hist when merging hypothesis to experiments

* ignore some error in ruff

* fix kaggle scenario bugs

* refine one line

* another bug

* another small bug

* fix ui bugs

* chage kaggle  train.py path

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Co-authored-by: Xu Yang <peteryang@vip.qq.com>

* fix CI

* Update rdagent/app/data_science/loop.py

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* add samplecsv into spec prompts

* fix CI

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Co-authored-by: TPLin22 <tplin2@163.com>
Co-authored-by: yuanteli <1957922024@qq.com>
Co-authored-by: Xisen Wang <118058822+xisen-w@users.noreply.github.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: Xu Yang <peteryang@vip.qq.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
Co-authored-by: Tim <illking@foxmail.com>
Co-authored-by: 炼金术师华华 <37462254+YeewahChan@users.noreply.github.com>
Co-authored-by: Linlang <30293408+SunsetWolf@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2025-01-17 22:53:05 +08:00
Xu Yang b7fcb13c33 feat: a unified CoSTEER to fit more scenarios (#491)
* Use ExtendedBaseSettings to replace BaseSettings

* update a more general way to pass the default setting

* update all code

* fix CI

* fix CI

* fix qlib scenario

* fix CI

* fix CI

* fix CI & add data science interfaces

* remove redundant code

* abandon costeer knowledge base v1

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Co-authored-by: Xu Yang <xuyang1@microsoft.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
2024-11-25 16:27:34 +08:00