Commit Graph

24 Commits

Author SHA1 Message Date
you-n-g f78175b37a feat: refactor for general data science (#498)
* refine ds modal for more cases: eval and es

* update model template

* prompts for model and ensemble

* fix a bug

* fix a bug

* init: ds workflow evovingstrategy

* Adding ensemble (#505)

* Initial Draft

* Updating logic for init

* Revising

* Successful Testing

* Updating to use the latest & right class

* bug: bug-fixing for testing

* data science loop changes

* data science loop base

* ds loop feedback

* fix

* remove measure_time because it's duplicated (in LoopBase)

* add the knowledge query for data_loader & feature

* edit ds workflow evaluator

* data_loader bug fix

* stop evolving when all tasks completed

* llm app change

* fix break all complete strategy

* Adding queried knowledge (#508)

Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>

* fix loop bug

* ds workflow evaluator; test; refine prompts

* workflow spec

* fix ci

* feature task changes

* ds loop change

* fix a bug in feat

* add query knowledge for model and workflow

* llm_debug info(for show) using pickle instead of json

* remove NextLoopException

* loop change

* coder raise CoderError when all sub_tasks failed

* rename code_dict to file_dict in FBWorkspace

* add CoSTEER unittest

* now show self.version in Task.get_task_information(), simplify CoSTEER sub tasks definition

* remove some properties in ModelTask, add model_type in it.

* fix llm app bug

* llm web app bug fix

* ds loop bug fix

* fix: give component code to feature&ens eval

* loop catch error bug

* rename load_from_raw_data to load_data

* feat: Add debug data creation functionality for data science scenarios

* support local folder (#511)

* support local folder

* remove unnecessary random

* KaggleScen Subclass

* small fix

* use template for style description

* update default scen to kaggle

* update sample data script

* make sure frac < 1

* fix a bug

* feature spec changes

* fix

* changeimport order

* clear unnecessary std outputs

* fix a typo

* create sample folder after unzip kaggle data

* feature/model test script update

* Align the data types across modules.

* fix a bug in model eval

* show line number

* move sample entry point to app

* spec & model prompt changes

* Refine the competition specification to address the data type problem and the coherence issue.

* fix some bugs

* add file filter in FBworkspace.code property

* support non-binary prediction

* avoid too much warnings

* fix a bug in ensemble module

* filtered the knowledge query in all modules

* delete RAG in idea proposal

* refine the code in ensemble

* show exp workspace in llm_st

* exp_gen bug fix

* feedback bug fix

* use `feature` instead of `feat01`

* Trace & method of judging if exp is completed change

* fix a bug in package calling and execute ci

* fix code

* bug fix

* bug fix

* fix a bug

* fix some bugs

* fix a bug

* refactor: Enhance error handling and feedback in data science loop

* support different use_azure on chat and embedding models

* multi-model proposal logic

* fix a small syntax error

* loopBase and some changes

* ensemble scores change

* fbworkspace.code -> .all_codes

* use all model codes in workflow coder

* check scores.csv's keys(model_names)

* model name changes

* add a todo in  ensemble test

* sota_exp changes

* give model info in exp gen

* add runner time limit

* config using debug data or not in evals

* exp to feedback base

* add feature code when writing model task

* small problem

* copying during sampling

* update

* refactor: Simplify code handling and improve workspace management

* model part output fix

* print model's execution time

* bug fix

* ensemble test fix

* ens small change

* ens_test bug fix

* Refine partial expansion logic to display only a few subfolders when their structure is uniform, improving readability in nested directories.

* several update on prompts

* sample subfolders

* Filter the stdout after code execution to remove irrelevant information e.g. progress bars, whitespace characters, excessive line breaks.

* Add some more prompts and comments

* several update on the first init rounds

* model timeout as error

* fix pattern of getting model codes in workspace

* small bux fix on model prompts

* remove get_code_with_key since we have regex pattern

* fix: Correct tqdm progress bar update logic in LoopBase class

* feat: Add diff generation and enhance feedback mechanism in data science loop

* update some fix to model and workflow prompts

* refine the logic of progress bar filter

* add last_successful_exp in exp_gen

* fix a one line bug

* add a hint in prompt

* fix data sample for bms

* fix data sample for bms

* hypothesis small fix

* crawler readme update

* fix component gen

* fix bug

* annotation change

* load description.md if it exists

* refactor: Simplify SOTA description handling in feedback and prompts

* refactor: Use shared templates for feedback and experiment descriptions

* change webapp for model codes changes

* update proposal

* add timeout message for docker run output

* fix

* refine the code in docker time processing

* use .shape instead of len() when do shape eval

* won't change size during iteration

* support bson sample

* sample support jsonl and bson

* add former_code to coder prompts

* a little speed us in debug data creating

* filter progress bar when eval ens and main

* avoid costeer makes no change to former code

* fix several log error

* add timeout judge threshold

* fix some bugs in the evaluation of component output shapes

* File structure for supporting litellm (#517)

Co-authored-by: Young <afe.young@gmail.com>

* ignore submission and show processing

* ignore submission and show processing

* add efficiency notice

* refactor: Enhance error message with detailed feedback summary

* refactor: Simplify component handling in DSExpGen class

* refactor: Update code structure and add docstring for clarity

* reserve one sample to each label in data sampling

* add Evaluation info

* refine costeer code to avoid giving same code twice

* use raw_description as plain text

* add a prompt hint to avoid same dict key

* model task name bug in first model exp gen

* fix a typo

* add some debug info in costeer tests

* task init change

* enhance data sampling

* refine the code in data_loader

* more reasonable loop

* fix a bug in data folder description

* add error msg & traceback to execution feedback

* fix llm error msg detection

* add task information to costeer eval & add cache to docker run(use zipfile to store the whole workspace)

* fix CI first round

* fix CI second round

* use txt to store test script to avoid pytest

* remove zipfile in requirements

* add azure.identity to requirements

* ignore debug web page

* component test changes

* remove redundent task_desc in model coder

* feat: Add APE module and prompts for automated prompt engineering

* fix: Update .gitignore and improve text formatting in eval.py

* refactor: Update print output and improve code comments and imports

* style: Fix string formatting and import order in ape.py and fmt.py

* exclude ape

* add a data folder notice

* reduce unnecessary output to stdout

* refine the code of describe_data_folder

* fix ci

* style: streamlit style update (#522)

* streamlit style update

* fix import

* fix format

* fix llm_st loop progress bar

* debugapp small change

* fix model str

* refine some prompts

* fix model str

* fix CI

* refine the logic associated with the data_folder

* fix ci

* small change

* set filter_progress_bar as default in execute

* model proposal with workflow

* add submission check in workflow eval

* fix bug

* small change

* fix CI

* fix CI

* refactor: Move generate_diff to utils and update DSExpGen logic

* more reasonable prompt describing metric direction

* fix a minor jinja2 bug

* quick fix exp_gen bugs

* fix the following bug

* fix

* fix some bugs

* remove workflow from model

* add pending_tasks_list in data science to enable coding model and workflow

* refine the code for handling JSON-formatted data descriptions

* assert with information

* ensure correct csv file name

* add logging to help record the output

* log competition

* add log tag for debug llm app

* test: Test ds refactor ll (#523)

* fix bugs to former scenario

* fix a bug because coding in rdloop changed

* fix the bug when feedback gets no hypothesis

* fix trace structure

* change all trace hist when merging hypothesis to experiments

* ignore some error in ruff

* fix kaggle scenario bugs

* refine one line

* another bug

* another small bug

* fix ui bugs

* chage kaggle  train.py path

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Co-authored-by: Xu Yang <peteryang@vip.qq.com>

* fix CI

* Update rdagent/app/data_science/loop.py

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* add samplecsv into spec prompts

* fix CI

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Co-authored-by: TPLin22 <tplin2@163.com>
Co-authored-by: yuanteli <1957922024@qq.com>
Co-authored-by: Xisen Wang <118058822+xisen-w@users.noreply.github.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: Xu Yang <peteryang@vip.qq.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
Co-authored-by: Tim <illking@foxmail.com>
Co-authored-by: 炼金术师华华 <37462254+YeewahChan@users.noreply.github.com>
Co-authored-by: Linlang <30293408+SunsetWolf@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2025-01-17 22:53:05 +08:00
you-n-g 7ffe284c12 feat: kaggle refactor (#489)
* init trail

* Add spec info

* auto unzip mlebench prepared data for out scenario

* successfully run example

* successfully run main

* simplify load traing

* extract load_from_raw_data

* split the fies(still buggy)
It should stop on ~20 epoch and reach the end

* some changes

* Fix bug to run example

* (success) until feature

* refine model and ensemble

* add metrics in ens.py

* update README &  spec.md

* ens change

* fix ens bug

* Delete rdagent/scenarios/kaggle/tpl_ex/aerial-cactus-identification/train.py

* add template_path in KG_conf

* fix test kaggle

* CI

* make test_import not check kaggle template codes

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Co-authored-by: Bowen Xian <xianbowen@outlook.com>
2024-11-20 17:01:18 +08:00
you-n-g 5d5084b87e feat: new-york-city-taxi-fare-prediction_template (#488)
* copy init version

* feat: new-york-city-taxi-fare-prediction_template

* add move to linear model

* Add more details about docker

* auto lint

* auto lint with new black
2024-11-15 16:47:44 +08:00
Linlang 33684cafe4 chore: remove torch in main code (#439)
* use np.ndarray in costeer model evaluators

* remove package

* fix test error

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Co-authored-by: Xu Yang <peteryang@vip.qq.com>
2024-10-21 15:56:04 +08:00
Way2Learn 5b41352e6d feat: Iceberge competition (#372)
* Relevant files fixed

* Make the entire system run

* Fix CI

* refine the template

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Co-authored-by: WinstonLiye <1957922024@qq.com>
2024-09-28 01:32:35 +08:00
XianBW d3db48e06e fix: test kaggle method (#296)
* fix test kaggle

* add hint for kaggle template test
2024-09-23 13:33:46 +08:00
you-n-g 7966f52faf update lint (#290) 2024-09-21 21:31:56 +08:00
XianBW f4dd0ffcd6 feat: kaggle templates related (#287)
* add kaggle test

* kaggle templates changes
2024-09-20 20:49:44 +08:00
Linlang 9dd35307a1 test: add test import (#242)
* add test import

* format with isort

* format with black

* merge main

* fix pytest error

* fix pytest error

* fix pytest error

* fix pytest error

* format with black

* fix pytest error

* fix pytest error

* fix pytest error

* fix pytest error

* fix pytest error

* format with isort

* Exclude entrance

* Add offline test

* auto-lint

* update coverage rate

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Co-authored-by: Young <afe.young@gmail.com>
2024-09-06 17:18:52 +08:00
Xu Yang 987cfc723e fix: first round app folder cleaning (#166)
* first round app folder cleaning

* fix CI
2024-08-05 18:11:23 +08:00
you-n-g dd4f46e209 fix: fix pickle problem (#140)
* fix pickle problem

* CI

* CI

* CI

* CI

* CI
2024-08-01 14:56:03 +08:00
Linlang faa2fb03ad CI checks that can be automatically repaired (#119)
* fix isort & black & toml-sort & sphinx error

* fix ci error

* fix ci error

* add comments

* Update Makefile

* change sphinx build command

* add auto-lint

* add black args

* format with black

* Auto Linting document

* fix ci error

---------

Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
Co-authored-by: Young <afe.young@gmail.com>
2024-07-26 12:12:16 +08:00
Linlang 571b5304cb fix mypy error (#91)
* fix mypy error

* fix mypy error

* fix ruff error

* change command

* delete python 3.8&3.9 from CI

* change command

* Some modifications according to the comments

* Add literal type

* Update .github/workflows/ci.yml

* Some modifications according to the comments

* fix ruff error

* fix meta dict

* Fix type

* Some modifications according to the comments

* merge latest code

* Some modifications according to the comments

* Some modifications according to the comments

* fix ci error

* fix ruff error

* Update Makefile

* Update Makefile

---------

Co-authored-by: Ubuntu <debug@debug.qjtqi00gqezu1eqs55bqdrf51f.px.internal.cloudapp.net>
Co-authored-by: Young <afe.young@gmail.com>
Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
2024-07-25 15:20:04 +08:00
you-n-g 0a4ac992e2 Agent Infra (#107)
* Agent Infra

* Update test/utils/test_agent_infra.py
2024-07-25 11:15:22 +08:00
you-n-g ea8c62a9fb Docker gpu fix (#89)
* GPU support

* check gpu

* get gpu kwargs based on its availability
2024-07-19 16:20:07 +08:00
Xu Yang e0a24fb46f Several update on the repo (see desc) (#76)
* ignore result csv file

* fix app scripts

* rename taskgenerator to developer and generate to develop

* fix a config bug in coder

* fix a small bug in factor coder evaluators

* remove a single logger in factor coder evaluators

* fix a small bug in model coder main.py

* rename Implementation to Workspace

* move the prepare the inject_code into FBWorkspace to align all the behavior

* fix a small bug in model feedback

* remove debug lines for multi processing and simplify evaluators multi proc

* add a copy function to workspace to freeze the workspace && add config prefix to speed up debugging

* make hypothesisgen a abc class

* use Qlib***Experiment

* fix a small bug

* rename Imp to Ws

* rename sub_implementations to sub_workspace_list

* fix a bug in feedback not presented as content in prompts

* move proposal pys to proposal folder

* reformat the folder

* align factor and model qlib workspace and use template to handle the workspace

* add a filter to evoagent to filter out false evo

* align multi_proc_n into RDAGENT seeting

* handle when runner gets empty experiment

* fix logger merge remaining problems

* fix black and isort automatically
2024-07-17 15:00:13 +08:00
Xu Yang 1854c25fb4 remove useless print command 2024-07-15 08:31:27 +00:00
Xu Yang 09825315d1 remove the new test file 2024-07-15 08:30:21 +00:00
WinstonLiyt bf1b140f68 re-commit 2024-07-11 08:49:37 +00:00
Linlang 29184aff9b fix pytest localenv error (#62) 2024-07-11 12:13:42 +08:00
Linlang 828a624238 Add template for reading experiment (#48)
* Add template for reading experiment

* add code

* read latest exp

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Co-authored-by: Young <afe.young@gmail.com>
2024-07-09 20:49:51 +08:00
Linlang 541c1ff990 Support LocalEnv (#53)
* Support LocalEnv

* resolve issues

* resolve issues

* resolve issues

* resolve issues

* resolve issues

* resolve issues
2024-07-09 12:45:32 +08:00
Xu Yang 1d9b4cd2ec Align factor coder into new framework (#47)
* use CoSTEER as component name

* rename factorimplementation to avoid confusion

* rename modelimplementation

* align benchmark and evolving evaluators

* add scenario to evaluator init function

* rename all factorimplementationknowledge in CoSTEER

* remove all scenario related information in component

* remove useless code

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Co-authored-by: xuyang1 <xuyang1@microsoft.com>
2024-07-05 17:42:00 +08:00
Linlang 833e7ce1b9 Initial framework for docker env (#40)
* Initial framework for docker env

* Update test name

* add features

* Download Qlib data with extra_volume

* fix pytest error

* Fix the parameters

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Co-authored-by: Young <afe.young@gmail.com>
2024-07-03 04:54:24 +08:00