Commit Graph

22 Commits

Author SHA1 Message Date
you-n-g 44ada185f4 feat: add naive experiment generator and update proposal configurations (#759)
* feat: Add naive experiment generator and update proposal configurations

* lint

* lint
2025-04-07 13:01:29 +08:00
XianBW b033215ca9 fix: add force parameter for cache_with_pickle & using cache when get kaggle leaderboard (#687)
* use kaggleApi latest edition

* add 'force' for cache_with_pickle, use cache when getting kaggle leaderboard
2025-03-16 00:50:17 +08:00
you-n-g 7f4c2d18c6 feat: refactor for general data science (#498)
* refine ds modal for more cases: eval and es

* update model template

* prompts for model and ensemble

* fix a bug

* fix a bug

* init: ds workflow evovingstrategy

* Adding ensemble (#505)

* Initial Draft

* Updating logic for init

* Revising

* Successful Testing

* Updating to use the latest & right class

* bug: bug-fixing for testing

* data science loop changes

* data science loop base

* ds loop feedback

* fix

* remove measure_time because it's duplicated (in LoopBase)

* add the knowledge query for data_loader & feature

* edit ds workflow evaluator

* data_loader bug fix

* stop evolving when all tasks completed

* llm app change

* fix break all complete strategy

* Adding queried knowledge (#508)

Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>

* fix loop bug

* ds workflow evaluator; test; refine prompts

* workflow spec

* fix ci

* feature task changes

* ds loop change

* fix a bug in feat

* add query knowledge for model and workflow

* llm_debug info(for show) using pickle instead of json

* remove NextLoopException

* loop change

* coder raise CoderError when all sub_tasks failed

* rename code_dict to file_dict in FBWorkspace

* add CoSTEER unittest

* now show self.version in Task.get_task_information(), simplify CoSTEER sub tasks definition

* remove some properties in ModelTask, add model_type in it.

* fix llm app bug

* llm web app bug fix

* ds loop bug fix

* fix: give component code to feature&ens eval

* loop catch error bug

* rename load_from_raw_data to load_data

* feat: Add debug data creation functionality for data science scenarios

* support local folder (#511)

* support local folder

* remove unnecessary random

* KaggleScen Subclass

* small fix

* use template for style description

* update default scen to kaggle

* update sample data script

* make sure frac < 1

* fix a bug

* feature spec changes

* fix

* changeimport order

* clear unnecessary std outputs

* fix a typo

* create sample folder after unzip kaggle data

* feature/model test script update

* Align the data types across modules.

* fix a bug in model eval

* show line number

* move sample entry point to app

* spec & model prompt changes

* Refine the competition specification to address the data type problem and the coherence issue.

* fix some bugs

* add file filter in FBworkspace.code property

* support non-binary prediction

* avoid too much warnings

* fix a bug in ensemble module

* filtered the knowledge query in all modules

* delete RAG in idea proposal

* refine the code in ensemble

* show exp workspace in llm_st

* exp_gen bug fix

* feedback bug fix

* use `feature` instead of `feat01`

* Trace & method of judging if exp is completed change

* fix a bug in package calling and execute ci

* fix code

* bug fix

* bug fix

* fix a bug

* fix some bugs

* fix a bug

* refactor: Enhance error handling and feedback in data science loop

* support different use_azure on chat and embedding models

* multi-model proposal logic

* fix a small syntax error

* loopBase and some changes

* ensemble scores change

* fbworkspace.code -> .all_codes

* use all model codes in workflow coder

* check scores.csv's keys(model_names)

* model name changes

* add a todo in  ensemble test

* sota_exp changes

* give model info in exp gen

* add runner time limit

* config using debug data or not in evals

* exp to feedback base

* add feature code when writing model task

* small problem

* copying during sampling

* update

* refactor: Simplify code handling and improve workspace management

* model part output fix

* print model's execution time

* bug fix

* ensemble test fix

* ens small change

* ens_test bug fix

* Refine partial expansion logic to display only a few subfolders when their structure is uniform, improving readability in nested directories.

* several update on prompts

* sample subfolders

* Filter the stdout after code execution to remove irrelevant information e.g. progress bars, whitespace characters, excessive line breaks.

* Add some more prompts and comments

* several update on the first init rounds

* model timeout as error

* fix pattern of getting model codes in workspace

* small bux fix on model prompts

* remove get_code_with_key since we have regex pattern

* fix: Correct tqdm progress bar update logic in LoopBase class

* feat: Add diff generation and enhance feedback mechanism in data science loop

* update some fix to model and workflow prompts

* refine the logic of progress bar filter

* add last_successful_exp in exp_gen

* fix a one line bug

* add a hint in prompt

* fix data sample for bms

* fix data sample for bms

* hypothesis small fix

* crawler readme update

* fix component gen

* fix bug

* annotation change

* load description.md if it exists

* refactor: Simplify SOTA description handling in feedback and prompts

* refactor: Use shared templates for feedback and experiment descriptions

* change webapp for model codes changes

* update proposal

* add timeout message for docker run output

* fix

* refine the code in docker time processing

* use .shape instead of len() when do shape eval

* won't change size during iteration

* support bson sample

* sample support jsonl and bson

* add former_code to coder prompts

* a little speed us in debug data creating

* filter progress bar when eval ens and main

* avoid costeer makes no change to former code

* fix several log error

* add timeout judge threshold

* fix some bugs in the evaluation of component output shapes

* File structure for supporting litellm (#517)

Co-authored-by: Young <afe.young@gmail.com>

* ignore submission and show processing

* ignore submission and show processing

* add efficiency notice

* refactor: Enhance error message with detailed feedback summary

* refactor: Simplify component handling in DSExpGen class

* refactor: Update code structure and add docstring for clarity

* reserve one sample to each label in data sampling

* add Evaluation info

* refine costeer code to avoid giving same code twice

* use raw_description as plain text

* add a prompt hint to avoid same dict key

* model task name bug in first model exp gen

* fix a typo

* add some debug info in costeer tests

* task init change

* enhance data sampling

* refine the code in data_loader

* more reasonable loop

* fix a bug in data folder description

* add error msg & traceback to execution feedback

* fix llm error msg detection

* add task information to costeer eval & add cache to docker run(use zipfile to store the whole workspace)

* fix CI first round

* fix CI second round

* use txt to store test script to avoid pytest

* remove zipfile in requirements

* add azure.identity to requirements

* ignore debug web page

* component test changes

* remove redundent task_desc in model coder

* feat: Add APE module and prompts for automated prompt engineering

* fix: Update .gitignore and improve text formatting in eval.py

* refactor: Update print output and improve code comments and imports

* style: Fix string formatting and import order in ape.py and fmt.py

* exclude ape

* add a data folder notice

* reduce unnecessary output to stdout

* refine the code of describe_data_folder

* fix ci

* style: streamlit style update (#522)

* streamlit style update

* fix import

* fix format

* fix llm_st loop progress bar

* debugapp small change

* fix model str

* refine some prompts

* fix model str

* fix CI

* refine the logic associated with the data_folder

* fix ci

* small change

* set filter_progress_bar as default in execute

* model proposal with workflow

* add submission check in workflow eval

* fix bug

* small change

* fix CI

* fix CI

* refactor: Move generate_diff to utils and update DSExpGen logic

* more reasonable prompt describing metric direction

* fix a minor jinja2 bug

* quick fix exp_gen bugs

* fix the following bug

* fix

* fix some bugs

* remove workflow from model

* add pending_tasks_list in data science to enable coding model and workflow

* refine the code for handling JSON-formatted data descriptions

* assert with information

* ensure correct csv file name

* add logging to help record the output

* log competition

* add log tag for debug llm app

* test: Test ds refactor ll (#523)

* fix bugs to former scenario

* fix a bug because coding in rdloop changed

* fix the bug when feedback gets no hypothesis

* fix trace structure

* change all trace hist when merging hypothesis to experiments

* ignore some error in ruff

* fix kaggle scenario bugs

* refine one line

* another bug

* another small bug

* fix ui bugs

* chage kaggle  train.py path

---------

Co-authored-by: Xu Yang <peteryang@vip.qq.com>

* fix CI

* Update rdagent/app/data_science/loop.py

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* add samplecsv into spec prompts

* fix CI

---------

Co-authored-by: TPLin22 <tplin2@163.com>
Co-authored-by: yuanteli <1957922024@qq.com>
Co-authored-by: Xisen Wang <118058822+xisen-w@users.noreply.github.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: Xu Yang <peteryang@vip.qq.com>
Co-authored-by: XianBW <36835909+XianBW@users.noreply.github.com>
Co-authored-by: Tim <illking@foxmail.com>
Co-authored-by: 炼金术师华华 <37462254+YeewahChan@users.noreply.github.com>
Co-authored-by: Linlang <30293408+SunsetWolf@users.noreply.github.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2025-01-17 22:53:05 +08:00
Xu Yang 8662211492 feat: align mlebench data and evaluation & several fix on kaggle workflow (#477)
* several improvement on kaggle loop

* small refinement on prompt

* fix bugs

* add the score of each model in every experiment

* fix ci error

* fix error in ventilator tpl

* fix CI

---------

Co-authored-by: Xu Yang <xuyang1@microsoft.com>
Co-authored-by: Bowen Xian <xianbowen@outlook.com>
Co-authored-by: WinstonLiye <1957922024@qq.com>
Co-authored-by: TPLin22 <tplin2@163.com>
2024-11-15 15:40:22 +08:00
XianBW 2161956315 chore: move use_auto_chat_cache_seed_gen and init_chat_cache_seed to LLMSett… (#444)
* move use_auto_chat_cache_seed_gen and init_chat_cache_seed to LLMSettings

* remove RD_AGENT_SETTINGS in llm_utils.py
2024-10-21 12:03:59 +08:00
XianBW 46d8247697 feat: use auto gen seed when using LLM cache (#441)
* initial version

* test requirements

* fix bugs

* fix bugs

* add annotation

* fix ruff error

* fix CI

* fix CI

* fix CI

* fix CI

* change random usage

* move cache_seed_gen to core/utils.py

* fix CI

* change cache_seed_gen name

---------

Co-authored-by: Young <afe.young@gmail.com>
2024-10-21 11:32:20 +08:00
Tim 61189fbe73 number of subprocesses <= number of tasks (#434) 2024-10-16 14:13:20 +08:00
Xu Yang ef373e1632 fix: fix cache result logic (#430)
* make cache logic more tidy

* update WeChat QR code
2024-10-14 19:35:21 +08:00
Xu Yang a8e4e6b4ae fix: fix a small bug in cache using module name and function name as unique folder name (#429) 2024-10-14 17:53:04 +08:00
Xu Yang 25472fc1e3 feat: use unified pickle cacher & move llm config into a isolated config (#424)
* simplify RDAgent conf

* add unified cacher(untested)

* fix small bugs

* fix a bug

* fix a small bug in runner

* use hash_key = None to skip cache

* fix CI

* in factor execution, ignore cache when raise exception

* add file locker to avoid mp calling

* fix CI

* use function __module__ name as folder in cache
2024-10-14 17:34:09 +08:00
Xu Yang 597b8a37f9 fix: improve_execution_time_in_kaggle_loop (#279)
* improve_execution_time_in_kaggle_loop

* fix CI

* fix CI

* fix CI
2024-09-20 12:07:13 +08:00
you-n-g b38cf35dcc fix: fix pickle problem (#140)
* fix pickle problem

* CI

* CI

* CI

* CI

* CI
2024-08-01 14:56:03 +08:00
Linlang c7cfd397ca CI checks that can be automatically repaired (#119)
* fix isort & black & toml-sort & sphinx error

* fix ci error

* fix ci error

* add comments

* Update Makefile

* change sphinx build command

* add auto-lint

* add black args

* format with black

* Auto Linting document

* fix ci error

---------

Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
Co-authored-by: Young <afe.young@gmail.com>
2024-07-26 12:12:16 +08:00
WinstonLiyt 45b7a169fe Fix two small bugs. (#121)
* Fix two small bugs.
2024-07-26 11:00:21 +08:00
Linlang 0b9d3046bf fix mypy error (#91)
* fix mypy error

* fix mypy error

* fix ruff error

* change command

* delete python 3.8&3.9 from CI

* change command

* Some modifications according to the comments

* Add literal type

* Update .github/workflows/ci.yml

* Some modifications according to the comments

* fix ruff error

* fix meta dict

* Fix type

* Some modifications according to the comments

* merge latest code

* Some modifications according to the comments

* Some modifications according to the comments

* fix ci error

* fix ruff error

* Update Makefile

* Update Makefile

---------

Co-authored-by: Ubuntu <debug@debug.qjtqi00gqezu1eqs55bqdrf51f.px.internal.cloudapp.net>
Co-authored-by: Young <afe.young@gmail.com>
Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
2024-07-25 15:20:04 +08:00
Linlang ae2aa6e9b4 Fix ruff error1 (#81)
* fix_ruff_error1

* fix_ruff_error

* fix ruff error

* fix ruff error

* pass model.py

* rename exception class

* rename exception class

* rename func name generate_feedback

* remove prepare args

* optimize code

* optimize code

* fix code error
2024-07-18 22:36:04 +08:00
XianBW 9d7aa09f54 adjust logging system (#51)
* remove ruff comment in log.py

* change log framework and fix llm_utils.py's logs

* Some thoughts for logging

* fix SingletonMeta's definition, maintain an instance dict for each class that inherits it

* adjust log codes directory, add some tag for factor implementation logging

* Update rdagent/core/conf.py

* fix factor task app & log

* fix log import

* Streamlet framework

* fix log tag to path logic

* Add todos

* Add example in docstring

* add log tag for llm_utils.py

* Capture lost content

---------

Co-authored-by: Young <afe.young@gmail.com>
Co-authored-by: you-n-g <you-n-g@users.noreply.github.com>
2024-07-16 20:35:42 +08:00
Xu Yang a126c84c92 Refine all the implementation code to higher quality for release (#29)
* refine CI script

* refine all the code to higher quality

* refine the script to factor extraction and implementation

* add task loader interface

* add a task loader interface && move pdf analysis to pdf task loader

* change the name to global variables

---------

Co-authored-by: xuyang1 <xuyang1@microsoft.com>
2024-06-18 11:50:03 +08:00
XianBW 55959c93ff Ci fix (#22)
* fix replace function of CI tool

* fix ruff errors (ignore some parts)

* add ruff rule ignore comment
2024-06-12 15:12:11 +08:00
Xu Yang 1e77557293 factor extraction pipeline ready (#16)
* run the code

* update code

* remove some redundant code

---------

Co-authored-by: xuyang1 <xuyang1@microsoft.com>
2024-06-05 15:36:15 +08:00
XianBW 62a2f7a742 add CI fix tool to app (#10)
* add CI fix tool to app

* perform ruff safe fix

* wrap too long lines in prompts.py
2024-05-30 10:33:07 +08:00
Xu Yang c6833b0858 update code (#9)
Co-authored-by: xuyang1 <xuyang1@microsoft.com>
2024-05-21 22:48:41 +08:00